RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PCDHGC3Q9UN70 934 aa27.07■■□□□ 1.92
NPLOC4-215ENST00000574095 KHNYNO15037 678 aaKnown RBP27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 TIMM44O43615 452 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 ZNF217O75362 1048 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 RPL6Q02878 288 aaKnown RBP27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 CT47A1Q5JQC4 288 aaPredicted RBP27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 RNF43Q68DV7 783 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 KIAA1324Q6UXG2 1013 aaKnown RBP27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 SLC36A4Q6YBV0 504 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 CHST9Q7L1S5 443 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 SLC47A2Q86VL8 602 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 WFDC5Q8TCV5 224 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 PPP1R13BQ96KQ4 1090 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 CPXM1Q96SM3 734 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 TRIM62Q9BVG3 475 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 TMEM74BQ9NUR3 256 aa27.06■■□□□ 1.92
NPLOC4-215ENST00000574095 IRAK2O43187 625 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 MOCS2O96007 188 aaPredicted RBP27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 PRKCHP24723 683 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 NNTQ13423 1086 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 TCP11X2Q5H9J9 407 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 SPDYCQ5MJ68 293 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 WFIKKN2Q8TEU8 576 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 CYB5D2Q8WUJ1 264 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 MYEOVQ96EZ4 313 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 GBP4Q96PP9 640 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 EDEM2Q9BV94 578 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 LHX5Q9H2C1 402 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 GGA2Q9UJY4 613 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 NFE2L3Q9Y4A8 694 aa27.05■■□□□ 1.92
NPLOC4-215ENST00000574095 AP5Z1O43299 807 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 SYNCRIPO60506 623 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 TRUB2O95900 331 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 PABPC1P11940 636 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 KRT9P35527 623 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 PITX1P78337 314 aaPredicted RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 E2F5Q15329 346 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 ZC3H12AQ5D1E8 599 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 MPP7Q5T2T1 576 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 LYSMD4Q5XG99 296 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 SERPINA13PQ6UXR4 307 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 KIAA0907Q7Z7F0 614 aaPredicted RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 ADIPOR2Q86V24 386 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 C1orf131Q8NDD1 294 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 PRICKLE1Q96MT3 831 aaPredicted RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 DDX50Q9BQ39 737 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 IRX2Q9BZI1 471 aaPredicted RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 MKRN2Q9H000 416 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 NUCKS1Q9H1E3 243 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 PRDM16Q9HAZ2 1276 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 PLCB1Q9NQ66 1216 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 XPO7Q9UIA9 1087 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 FHOD1Q9Y613 1164 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 ATXN2Q99700 1313 aaKnown RBP27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 GON4LQ3T8J9 2241 aa27.04■■□□□ 1.92
NPLOC4-215ENST00000574095 LNP1A1A4G5 178 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 EPHX1P07099 455 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 HLA-EP13747 358 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 ITPKAP23677 461 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 CD70P32970 193 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 IRX4P78413 519 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 RAPGEF1Q13905 1077 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 CKAP5Q14008 2032 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 DRAP1Q14919 205 aaPredicted RBP27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 DCAF6Q58WW2 860 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 KLHDC7AQ5VTJ3 777 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 SYT12Q8IV01 421 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 FAM71AQ8IYT1 594 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 DEFB106AQ8N104 65 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 AHI1Q8N157 1196 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 HJURPQ8NCD3 748 aaPredicted RBP27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 ENOX1Q8TC92 643 aaKnown RBP27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 TAB2Q9NYJ8 693 aa27.03■■□□□ 1.92
NPLOC4-215ENST00000574095 TM4SF5O14894 197 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 IGLV3-25P01717 112 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 EEF1GP26641 437 aaKnown RBP27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 RPS24P62847 133 aaKnown RBP27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 MS4A13Q5J8X5 152 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 PPM1JQ5JR12 505 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 MBLAC2Q68D91 279 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 SMYD5Q6GMV2 418 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 OR6B2Q6IFH4 312 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 FAM183BPQ6ZVS7 135 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 TMPRSS6Q8IU80 811 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 MFN1Q8IWA4 741 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 CFAP52Q8N1V2 620 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 NOX5Q96PH1 765 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 LSM14BQ9BX40 385 aaKnown RBP27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 PLA2G4CQ9UP65 541 aa27.02■■□□□ 1.92
NPLOC4-215ENST00000574095 C4orf47A7E2U8 309 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 GRAP2O75791 330 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 APOEP02649 317 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 ERBB2P04626 1255 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 KCNA4P22459 653 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 ZNF33AQ06730 810 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 FNDC3BQ53EP0 1204 aaKnown RBP27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 TRIM61Q5EBN2 209 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 EFHC1Q5JVL4 640 aa27.01■■□□□ 1.91
NPLOC4-215ENST00000574095 RAP1GAP2Q684P5 730 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms