RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, human

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAP1-208	ENST00000573872	CHRNB1	P11230	501 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	TYR	P14679	529 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	AOC1	P19801	751 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	SLC6A11	P48066	632 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	GALK1	P51570	392 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	SGSH	P51688	502 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	CLCN5	P51795	746 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	MESP2	Q0VG99	397 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	CCIN	Q13939	588 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	PON2	Q15165	354 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	CDO1	Q16878	200 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	ANO4	Q32M45	955 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	MS4A13	Q5J8X5	152 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	TMEM31	Q5JXX7	168 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	FSTL4	Q6MZW2	842 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	RFWD3	Q6PCD5	774 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	DCUN1D2	Q6PH85	259 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	FAM131B	Q86XD5	332 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	CCDC170	Q8IYT3	715 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	FBXL6	Q8N531	539 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	SPC24	Q8NBT2	197 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	FLCN	Q8NFG4	579 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	FAM172A	Q8WUF8	416 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	EZH1	Q92800	747 aa	Predicted RBP	13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	CD101	Q93033	1021 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	CLDN23	Q96B33	292 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	NELL2	Q99435	816 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	P2RY13	Q9BPV8	354 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	CNPY3	Q9BT09	278 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	BBS2	Q9BXC9	721 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	TKTL2	Q9H0I9	626 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	MFSD1	Q9H3U5	465 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	WDCP	Q9H6R7	721 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	MRPL47	Q9HD33	250 aa	Known RBP	13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	DLGAP2	Q9P1A6	1054 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	MYO1A	Q9UBC5	1043 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	MRPS17	Q9Y2R5	130 aa	Known RBP	13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	MIA3	Q5JRA6	1907 aa		13.64	□□□□□ -0.23
TRAP1-208	ENST00000573872	ZDBF2	Q9HCK1	2354 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872		A0A0A0MRY4	1105 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	FAM170B	A6NMN3	283 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	TULP3	O75386	442 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	PAGE1	O75459	146 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	H2AFZ	P0C0S5	128 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	TMEM253	P0C7T8	217 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	HOXD9	P28356	352 aa	Predicted RBP	13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	UBXN2B	Q14CS0	331 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	MPPE1	Q53F39	396 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	MPP7	Q5T2T1	576 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	ASTL	Q6HA08	431 aa	Predicted RBP	13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	H2AFV	Q71UI9	128 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	TMTC1	Q8IUR5	882 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	SUGP1	Q8IWZ8	645 aa	Known RBP	13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	ARFGAP1	Q8N6T3	406 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	RNF34	Q969K3	372 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	DDX50	Q9BQ39	737 aa	Known RBP	13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	LRFN3	Q9BTN0	628 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	TMPRSS4	Q9NRS4	437 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	PLK2	Q9NYY3	685 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	SLC12A6	Q9UHW9	1150 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	CLEC4E	Q9ULY5	219 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	NDRG2	Q9UN36	371 aa	Known RBP	13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	PAXBP1	Q9Y5B6	917 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	HS3ST4	Q9Y661	456 aa		13.63	□□□□□ -0.23
TRAP1-208	ENST00000573872	KMT2E	Q8IZD2	1858 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	SOWAHD	A6NJG2	315 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	TSPAN3	O60637	253 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	CISD3	P0C7P0	127 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	CHRM1	P11229	460 aa	Predicted RBP	13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	TACR2	P21452	398 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	DRD1	P21728	446 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	C5orf22	Q49AR2	442 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	RAP1GAP2	Q684P5	730 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	CHSY1	Q86X52	802 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	ZNF683	Q8IZ20	524 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	NAT16	Q8N8M0	369 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	TMEM105	Q8N8V8	129 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	DDI1	Q8WTU0	396 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	BHMT	Q93088	406 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	NTAN1	Q96AB6	310 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	TMA16	Q96EY4	203 aa	Known RBP	13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	C1orf74	Q96LT6	269 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	XPO6	Q96QU8	1125 aa	Known RBP	13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	HAPLN3	Q96S86	360 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	PNKP	Q96T60	521 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	NUP85	Q9BW27	656 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	INTU	Q9ULD6	942 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	SIT1	Q9Y3P8	196 aa		13.62	□□□□□ -0.23
TRAP1-208	ENST00000573872	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	EIF3CL	B5ME19	914 aa	Known RBP	13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	TRIM24	O15164	1050 aa		13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	EGF	P01133	1207 aa		13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	CYBB	P04839	570 aa		13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	DCN	P07585	359 aa	Known RBP	13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	PSMA2	P25787	234 aa		13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	AVPR2	P30518	371 aa		13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	ADRA1B	P35368	520 aa		13.61	□□□□□ -0.23
TRAP1-208	ENST00000573872	RPS9	P46781	194 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms