RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 RHOT1Q8IXI2 618 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 GJD3Q8N144 294 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 SLC44A3Q8N4M1 653 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 CPA6Q8N4T0 437 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 DDI1Q8WTU0 396 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 HSPH1Q92598 858 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 HAPLN3Q96S86 360 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 LINC00597Q9H2U6 94 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 GOLPH3Q9H4A6 298 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 EBF3Q9H4W6 596 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 DHX35Q9H5Z1 703 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 XPO7Q9UIA9 1087 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 AP4E1Q9UPM8 1137 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 HYOU1Q9Y4L1 999 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 HS3ST4Q9Y661 456 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 ALG6Q9Y672 507 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 PTPRDP23468 1912 aa9.78□□□□□ -0.84
NPLOC4-208ENST00000572351 GOLGA6L7A0A1B0GV03 622 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 GRID2IPA4D2P6 1211 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 TRDMT1O14717 391 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 CREB3O43889 395 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 GREM1O60565 184 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 SRGAP2O75044 1071 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 ARSAP15289 507 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 TCF4P15884 667 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 MSNP26038 577 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 GGCXP38435 758 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 TAS2R40P59535 323 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 PFKPQ01813 784 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 SCAPQ12770 1279 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 RUNX3Q13761 415 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 AUHQ13825 339 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 EML3Q32P44 896 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 MPPE1Q53F39 396 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 PPP6R3Q5H9R7 873 aaPredicted RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 RABGAP1LQ5R372 815 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 ERMARDQ5T6L9 678 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 RWDD4Q6NW29 188 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 PEX26Q7Z412 305 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 RNF135Q8IUD6 432 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 LGI2Q8N0V4 545 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 CCAR2Q8N163 923 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 CPXM2Q8N436 756 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 ARFGAP1Q8N6T3 406 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 HJURPQ8NCD3 748 aaPredicted RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 TTC8Q8TAM2 541 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 BHMTQ93088 406 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 TMA16Q96EY4 203 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 RPRD1AQ96P16 312 aaPredicted RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 PEBP4Q96S96 227 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 EPAS1Q99814 870 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 FAM83CQ9BQN1 747 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 SNRNP25Q9BV90 132 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 BBS2Q9BXC9 721 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 ANLNQ9NQW6 1124 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 TMPRSS4Q9NRS4 437 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 GPATCH2LQ9NWQ4 482 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 STOML2Q9UJZ1 356 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 AMFRQ9UKV5 643 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 VANGL2Q9ULK5 521 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 FZD10Q9ULW2 581 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 SORCS3Q9UPU3 1222 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 SNX10Q9Y5X0 201 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 CAPN6Q9Y6Q1 641 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 PATJQ8NI35 1801 aa9.77□□□□□ -0.85
NPLOC4-208ENST00000572351 E9PAM4 449 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 NEDD8-MDP1E9PL57 170 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 MAP3K13O43283 966 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 DAPK3O43293 454 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 PSTPIP1O43586 416 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 FTCDO95954 541 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 KRT1P04264 644 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 CYP17A1P05093 508 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 RARAP10276 462 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 ADH5P11766 374 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 SRFP11831 508 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 IL1R2P27930 398 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 SLC6A4P31645 630 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 DNA2P51530 1060 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 MLLT6P55198 1093 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 TPI1P60174 286 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 AMPD2Q01433 879 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 SLC25A11Q02978 314 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 GAD2Q05329 585 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 TNK2Q07912 1038 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 DHCR24Q15392 516 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 ITPRIPL2Q3MIP1 535 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 FAM133BQ5BKY9 247 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 LY6G5CQ5SRR4 150 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 PIK3R6Q5UE93 754 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 TTC39BQ5VTQ0 682 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 NADSYN1Q6IA69 706 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 RFWD3Q6PCD5 774 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 POLNQ7Z5Q5 900 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 CPNE8Q86YQ8 564 aa9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 PSTKQ8IV42 348 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-208ENST00000572351 MAP7D3Q8IWC1 876 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms