RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MMRN2Q9H8L6 949 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 PRSS16Q9NQE7 514 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 EXOC1Q9NV70 894 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 SHROOM3Q8TF72 1996 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 KLRC4O43908 158 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 YEATS4O95619 227 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 C21orf59P57076 290 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 SEMG2Q02383 582 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 DNAJC3Q13217 504 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 TTC31Q49AM3 519 aaPredicted RBP20.73■□□□□ 0.91
CCDC40-206ENST00000572083 ADIPOR2Q86V24 386 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 PIGZQ86VD9 579 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 FMNL3Q8IVF7 1028 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 WFIKKN2Q8TEU8 576 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 TMEM174Q8WUU8 243 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 HEXIM2Q96MH2 286 aaKnown RBP20.73■□□□□ 0.91
CCDC40-206ENST00000572083 SLC6A18Q96N87 628 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 ZNF396Q96N95 335 aaPredicted RBP20.73■□□□□ 0.91
CCDC40-206ENST00000572083 SGK2Q9HBY8 427 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 GGA2Q9UJY4 613 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 FRMD4BQ9Y2L6 1034 aa20.73■□□□□ 0.91
CCDC40-206ENST00000572083 COL5A1P20908 1838 aaPredicted RBP20.73■□□□□ 0.91
CCDC40-206ENST00000572083 A0A1B0GTQ1 180 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 FAM47DPA6NHR8 397 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 PDXKO00764 312 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 ENC1O14682 589 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 PAPSS1O43252 624 aaPredicted RBP20.72■□□□□ 0.91
CCDC40-206ENST00000572083 TLX3O43711 291 aaPredicted RBP20.72■□□□□ 0.91
CCDC40-206ENST00000572083 IGHV4-34P06331 123 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 JUPP14923 745 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 HNF1BP35680 557 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 VAMP7P51809 220 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 ZBTB16Q05516 673 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 TRIP4Q15650 581 aaPredicted RBP20.72■□□□□ 0.91
CCDC40-206ENST00000572083 C6orf118Q5T5N4 469 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 NDRG1Q92597 394 aaKnown RBP20.72■□□□□ 0.91
CCDC40-206ENST00000572083 ACE2Q9BYF1 805 aaPredicted RBP20.72■□□□□ 0.91
CCDC40-206ENST00000572083 MTG2Q9H4K7 406 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 FBRSQ9HAH7 460 aa20.72■□□□□ 0.91
CCDC40-206ENST00000572083 CFAP46Q8IYW2 2715 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 C7P10643 843 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 PABPC1P11940 636 aaKnown RBP20.71■□□□□ 0.91
CCDC40-206ENST00000572083 HARS2P49590 506 aaKnown RBP20.71■□□□□ 0.91
CCDC40-206ENST00000572083 SGSHP51688 502 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 TKTL1P51854 596 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 RACK1P63244 317 aaKnown RBP20.71■□□□□ 0.91
CCDC40-206ENST00000572083 PPP3CAQ08209 521 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 FOXD4L6Q3SYB3 417 aaPredicted RBP20.71■□□□□ 0.91
CCDC40-206ENST00000572083 KMT5BQ4FZB7 885 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 RAB41Q5JT25 222 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 MBLAC2Q68D91 279 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 ZNF776Q68DI1 518 aaPredicted RBP20.71■□□□□ 0.91
CCDC40-206ENST00000572083 FOXD4L3Q6VB84 417 aaPredicted RBP20.71■□□□□ 0.91
CCDC40-206ENST00000572083 AHI1Q8N157 1196 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 WFDC5Q8TCV5 224 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 CNDP2Q96KP4 475 aaKnown RBP20.71■□□□□ 0.91
CCDC40-206ENST00000572083 ULBP1Q9BZM6 244 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 DNAI2Q9GZS0 605 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 PRORYQ9H606 182 aa20.71■□□□□ 0.91
CCDC40-206ENST00000572083 ATXN7O15265 892 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 RFPL3O75679 317 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 ZBED1O96006 694 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 DLDP09622 509 aaKnown RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 ABCB4P21439 1286 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 EIF2S3P41091 472 aaKnown RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 FOXD4L5Q5VV16 416 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 KIAA0895LQ68EN5 471 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 LRRC69Q6ZNQ3 347 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 BHLHA9Q7RTU4 235 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 GANCQ8TET4 914 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 FOXD4L4Q8WXT5 416 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 FCRL3Q96P31 734 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 ELF4Q99607 663 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-206ENST00000572083 FAM13BQ9NYF5 915 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 SERGEFQ9UGK8 458 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 SFMBT1Q9UHJ3 866 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 SERTAD1Q9UHV2 236 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 PCDHGA1Q9Y5H4 931 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 RAI2Q9Y5P3 530 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 AK5Q9Y6K8 562 aa20.7■□□□□ 0.9
CCDC40-206ENST00000572083 TENM4Q6N022 2769 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 TULP2O00295 520 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 VILLO15195 856 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 MSI1O43347 362 aaKnown RBP20.69■□□□□ 0.9
CCDC40-206ENST00000572083 DFNA5O60443 496 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 LDOC1O95751 146 aaPredicted RBP20.69■□□□□ 0.9
CCDC40-206ENST00000572083 WNT1P04628 370 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 ITGAVP06756 1048 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 PDIA4P13667 645 aaKnown RBP20.69■□□□□ 0.9
CCDC40-206ENST00000572083 PDE4CQ08493 712 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 RESP18Q5W5W9 173 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 KIAA0907Q7Z7F0 614 aaPredicted RBP20.69■□□□□ 0.9
CCDC40-206ENST00000572083 CEP57L1Q8IYX8 460 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 SLC4A11Q8NBS3 891 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 CCDC150Q8NCX0 1101 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 EDEM1Q92611 657 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 GOLGA1Q92805 767 aa20.69■□□□□ 0.9
CCDC40-206ENST00000572083 TMA16Q96EY4 203 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms