RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 TTC24A2A3L6 582 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 YJEFN3A6XGL0 299 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 E7ENQ6 273 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 E9PBE3 544 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 PPP1R12AO14974 1030 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 KLHL41O60662 606 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 CRCPO75575 148 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 ERCC2P18074 760 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 CDCA2Q69YH5 1023 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 UNC5AQ6ZN44 842 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 THEM5Q8N1Q8 247 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 CLPTM1LQ96KA5 538 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 LHX5Q9H2C1 402 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 SLC24A2Q9UI40 661 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 UBA6A0AVT1 1052 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 CSH1P0DML2 217 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 CSH2P0DML3 217 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 GARSP41250 739 aaKnown RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 DLG2Q15700 870 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 ATG16L1Q676U5 607 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 STRA8Q7Z7C7 330 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 PRR11Q96HE9 360 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 CHKBQ9Y259 395 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 LY75O60449 1722 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 MSX2P35548 267 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 ASPHQ12797 758 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 PDK2Q15119 407 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 C6orf89Q6UWU4 347 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 PIGWQ7Z7B1 504 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 DEFB128Q7Z7B8 93 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 WDR75Q8IWA0 830 aaKnown RBP16.68■□□□□ 0.26
RAB40B-206ENST00000571995 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 P2RY11Q96G91 374 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 GRID1Q9ULK0 1009 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 VANGL2Q9ULK5 521 aa16.68■□□□□ 0.26
RAB40B-206ENST00000571995 RGS2P41220 211 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 MAP2K5Q13163 448 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 STILQ15468 1287 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 CERCAMQ5T4B2 595 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 VWA5B1Q5TIE3 1220 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 ANKRD52Q8NB46 1076 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 TBC1D10AQ9BXI6 508 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 ZCWPW1Q9H0M4 648 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 XPNPEP3Q9NQH7 507 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 OR12D3Q9UGF7 316 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 FCHO1O14526 889 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 DNAJB2P25686 324 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 GRM5P41594 1212 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 PDK1Q15118 436 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 RASA2Q15283 850 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 MARK4Q96L34 752 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 FGD4Q96M96 766 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 FOXP3Q9BZS1 431 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 ARHGAP39Q9C0H5 1083 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 C2CD2Q9Y426 696 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 APOEP02649 317 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 TSPAN8P19075 237 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 OVOS1Q6IE37 1185 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 LAYNQ6UX15 382 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 CDHR3Q6ZTQ4 885 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 RIBC1Q8N443 379 aaPredicted RBP16.67■□□□□ 0.26
RAB40B-206ENST00000571995 ATPAF2Q8N5M1 289 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 NAT8LQ8N9F0 302 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 SKA2Q8WVK7 121 aaPredicted RBP16.67■□□□□ 0.26
RAB40B-206ENST00000571995 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAB40B-206ENST00000571995 APBA2Q99767 749 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
RAB40B-206ENST00000571995 SMPD4Q9NXE4 827 aa16.67■□□□□ 0.26
RAB40B-206ENST00000571995 F8W810 466 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 TPP1O14773 563 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 NPR3P17342 541 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 UBAP2LQ14157 1087 aaKnown RBP16.66■□□□□ 0.26
RAB40B-206ENST00000571995 PDK4Q16654 411 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 SLC39A12Q504Y0 691 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 SPRYD7Q5W111 196 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 GRAMD1AQ96CP6 724 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 SYBUQ9NX95 663 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 APOBEC2Q9Y235 224 aaKnown RBP16.66■□□□□ 0.26
RAB40B-206ENST00000571995 DOCK5Q9H7D0 1870 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 CFAP73A6NFT4 308 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 TP73O15350 636 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 LGR5O75473 907 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 PDE5AO76074 875 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 ASMTLO95671 621 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 NME5P56597 212 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 CLDN10P78369 228 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 TRIM32Q13049 653 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 C10orf120Q5SQS8 335 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 BZW1Q7L1Q6 419 aaKnown RBP16.66■□□□□ 0.26
RAB40B-206ENST00000571995 SPATA22Q8NHS9 363 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 GIPC2Q8TF65 315 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 MCRS1Q96EZ8 462 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 OMDQ99983 421 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 ARL8BQ9NVJ2 186 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 MYADML2A6NDP7 307 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 SDR42E2A6NKP2 422 aa16.66■□□□□ 0.26
RAB40B-206ENST00000571995 AIM2O14862 343 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms