RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 MGAT1P26572 445 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 ZNF280AP59817 542 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-205ENST00000571272 CUL3Q13618 768 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 ITGA9Q13797 1035 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 TRIP10Q15642 601 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 SLC10A6Q3KNW5 377 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 CLEC4CQ8WTT0 213 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 ATXN7L3BQ96GX2 97 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 LGMNQ99538 433 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 GPR20Q99678 358 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 GJA3Q9Y6H8 435 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 A6NJR5 290 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 PAPSS1O43252 624 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-205ENST00000571272 DCXO43602 365 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 CCNT2O60583 730 aaKnown RBP17.97■□□□□ 0.47
SCARF1-205ENST00000571272 SLC6A3Q01959 620 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 USP4Q13107 963 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 STILQ15468 1287 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 FRMD7Q6ZUT3 714 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 ACAD11Q709F0 780 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 AGR3Q8TD06 166 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 TBCBQ99426 244 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 OXCT2Q9BYC2 517 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-205ENST00000571272 KLHL4Q9C0H6 718 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 ZNF112Q9UJU3 913 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 POMPQ9Y244 141 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 GABBR2O75899 941 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 STK10O94804 968 aaKnown RBP17.97■□□□□ 0.47
SCARF1-205ENST00000571272 PRKCGP05129 697 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 ISLR2Q6UXK2 745 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 ST13P4Q8IZP2 240 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-205ENST00000571272 TNS4Q8IZW8 715 aa17.97■□□□□ 0.47
SCARF1-205ENST00000571272 MDM4O15151 490 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 ITGA2BP08514 1039 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 VAV1P15498 845 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 RAG1P15918 1043 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 CNTFP26441 200 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 TYK2P29597 1187 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 ATICP31939 592 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 SEMA5AQ13591 1074 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 HNRNPDQ14103 355 aaKnown RBP17.96■□□□□ 0.47
SCARF1-205ENST00000571272 TMEM132DQ14C87 1099 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 PGM2L1Q6PCE3 622 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 CMC1Q7Z7K0 106 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 ADGRG6Q86SQ4 1221 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 PYROXD2Q8N2H3 581 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 TFB1MQ8WVM0 346 aaKnown RBP17.96■□□□□ 0.47
SCARF1-205ENST00000571272 CDKL2Q92772 493 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 COPS5Q92905 334 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 CENPKQ9BS16 269 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 IFT122Q9HBG6 1241 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 DTLQ9NZJ0 730 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 ITGA11Q9UKX5 1188 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 GAS2O43903 313 aaKnown RBP17.96■□□□□ 0.47
SCARF1-205ENST00000571272 ERVK-10P10266 1014 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 RALBP11234 206 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 ITGAXP20702 1163 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 GMPSP49915 693 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-205ENST00000571272 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 MARK2Q7KZI7 788 aaKnown RBP17.96■□□□□ 0.47
SCARF1-205ENST00000571272 AZIN2Q96A70 460 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 SIKE1Q9BRV8 207 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 STK32BQ9NY57 414 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 AP4E1Q9UPM8 1137 aa17.96■□□□□ 0.47
SCARF1-205ENST00000571272 DOCK1Q14185 1865 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 ANKRD33BA6NCL7 494 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 E9PBE3 544 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 DPYSL4O14531 572 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 KLHL41O60662 606 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 UQCRBP14927 111 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 VCLP18206 1134 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 MLH1P40692 756 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 GRIA2P42262 883 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 NIPAL4Q0D2K0 466 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 INCA1Q0VD86 236 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 TBL3Q12788 808 aaKnown RBP17.95■□□□□ 0.46
SCARF1-205ENST00000571272 MMEL1Q495T6 779 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 ACTRT2Q8TDY3 377 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 GORASP1Q9BQQ3 440 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 COPG2Q9UBF2 871 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 DCDC2Q9UHG0 476 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 A0A087WZ62 844 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 PGK2P07205 417 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 CD1EP15812 388 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 GTF2A2P52657 109 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 GRAMD1BQ3KR37 738 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 CCDC185Q8N715 623 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 C7orf31Q8N865 590 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 COLGALT1Q8NBJ5 622 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 HTR3CQ8WXA8 447 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 CMTM5Q96DZ9 223 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 SPATA33Q96N06 139 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 QKIQ96PU8 341 aaKnown RBP eCLIP17.95■□□□□ 0.46
SCARF1-205ENST00000571272 CSPG4P5Q96PW8 444 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 KCTD15Q96SI1 283 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-205ENST00000571272 MRPL45Q9BRJ2 306 aaKnown RBP17.95■□□□□ 0.46
SCARF1-205ENST00000571272 FDXACB1Q9BRP7 624 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-205ENST00000571272 GCOM2Q9BZD3 368 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-205ENST00000571272 DPP3Q9NY33 737 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms