RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 USP8P40818 1118 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 GPD2P43304 727 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 ACADSBP45954 432 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 RING1Q06587 406 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 EXOC3L4Q17RC7 722 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 SERPINA13PQ6UXR4 307 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 SYT12Q8IV01 421 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 SERPINB11Q96P15 392 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 ELOVL2Q9NXB9 296 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 THAP10Q9P2Z0 257 aaPredicted RBP12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 APEX2Q9UBZ4 518 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 CLEC4EQ9ULY5 219 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 CYP8B1Q9UNU6 501 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 ATXN2Q99700 1313 aaKnown RBP12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 IGHV1OR15-9A0A0B4J2B8 117 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 TYW5A2RUC4 315 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 GTPBP10A4D1E9 387 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 PATE3B3GLJ2 98 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 CAPN9O14815 690 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 TIMM44O43615 452 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 IGLV3-27P01718 113 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 HOXD12P35452 270 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 IL12RB1P42701 662 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 TBX4P57082 545 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 ARHGAP44Q17R89 818 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 FUT11Q495W5 492 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 TRIM61Q5EBN2 209 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 GJB7Q6PEY0 223 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 SCUBE3Q8IX30 993 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 DQX1Q8TE96 717 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 WFIKKN2Q8TEU8 576 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 STK32AQ8WU08 396 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 TMA16Q96EY4 203 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 DDX50Q9BQ39 737 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 NUSAP1Q9BXS6 441 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 NUP62CLQ9H1M0 184 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 SLC6A17Q9H1V8 727 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 EVLQ9UI08 416 aaPredicted RBP12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 DACH1Q9UI36 760 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 EML5Q05BV3 1969 aa12.86□□□□□ -0.35
CTDNEP1-205ENST00000570828 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 E5RJQ4 531 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 IRAK2O43187 625 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ACSL4O60488 711 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 NDUFS2O75306 463 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 CFIP05156 583 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ADRB1P08588 477 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 SLC9A1P19634 815 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ITPKAP23677 461 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 HLA-FP30511 346 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 RPL34P49207 117 aaKnown RBP12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 LMAN2Q12907 356 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 PDCLQ13371 301 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 NNTQ13423 1086 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ENPP2Q13822 863 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ZNF234Q14588 700 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 MPP7Q5T2T1 576 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 DAB2IPQ5VWQ8 1189 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 AHI1Q8N157 1196 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ZNF557Q8N988 423 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 HJURPQ8NCD3 748 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ZNF606Q8WXB4 792 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 SORCS1Q8WY21 1168 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 SHC3Q92529 594 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 HSPA12BQ96MM6 686 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 MED15Q96RN5 788 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 PRDM16Q9HAZ2 1276 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ACP6Q9NPH0 428 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 ABCB8Q9NUT2 735 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
CTDNEP1-205ENST00000570828 BECN2A8MW95 431 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 TM4SF5O14894 197 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PAPSS1O43252 624 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 MAP3K7O43318 606 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 TBL1XO60907 577 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 FYNP06241 537 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 EPHX1P07099 455 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PABPC1P11940 636 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PRKCHP24723 683 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PON1P27169 355 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 SGSHP51688 502 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 IRX4P78413 519 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 APBA1Q02410 837 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 ZNF33AQ06730 810 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 MAN2A1Q16706 1144 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 FNDC3BQ53EP0 1204 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 FAM133BQ5BKY9 247 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PIK3R6Q5UE93 754 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 PEAR1Q5VY43 1037 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 TMEM215Q68D42 235 aa12.84□□□□□ -0.35
CTDNEP1-205ENST00000570828 CHST9Q7L1S5 443 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms