RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 IGLV3-19P01714 112 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 CD70P32970 193 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 RPS14P62263 151 aaKnown RBP12.6□□□□□ -0.39
CAPN3-220ENST00000569827 CAMK2GQ13555 558 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-220ENST00000569827 EIF4HQ15056 248 aaKnown RBP12.6□□□□□ -0.39
CAPN3-220ENST00000569827 RAB41Q5JT25 222 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 DHRS13Q6UX07 377 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
CAPN3-220ENST00000569827 TMPRSS7Q7RTY8 843 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 ADIPOR2Q86V24 386 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 GATAD2AQ86YP4 633 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 ZNF276Q8N554 614 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 CCDC150Q8NCX0 1101 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 PLD4Q96BZ4 506 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 TMEM176AQ96HP8 235 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 CDK5RAP1Q96SZ6 601 aaKnown RBP12.6□□□□□ -0.39
CAPN3-220ENST00000569827 TMEM8AQ9HCN3 771 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 PRSS16Q9NQE7 514 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 TSPAN16Q9UKR8 245 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 ANKRD6Q9Y2G4 727 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 COL5A1P20908 1838 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-220ENST00000569827 YJEFN3A6XGL0 299 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 E7ENQ6 273 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 NPC1O15118 1278 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 FLRT2O43155 660 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 ZBED1O96006 694 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 SLC6A4P31645 630 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 RGS7P49802 495 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 MXI1P50539 228 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 AFF3P51826 1226 aaKnown RBP12.59□□□□□ -0.39
CAPN3-220ENST00000569827 ADAM9Q13443 819 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 TRIP4Q15650 581 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-220ENST00000569827 MPPE1Q53F39 396 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 MBLAC2Q68D91 279 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 IL27RAQ6UWB1 636 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 FAM217AQ8IXS0 508 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 TMEM174Q8WUU8 243 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 MYEOVQ96EZ4 313 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 SLC6A18Q96N87 628 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 DCBLD2Q96PD2 775 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 TMEM245Q9H330 911 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 STIM2Q9P246 746 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 SERGEFQ9UGK8 458 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 RCOR1Q9UKL0 485 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 NFE2L3Q9Y4A8 694 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 KALRNO60229 2985 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 MGAQ8IWI9 3026 aa12.59□□□□□ -0.39
CAPN3-220ENST00000569827 MAPK13O15264 365 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 TBL1XO60907 577 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 DKK1O94907 266 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 HSP90AA1P07900 732 aaKnown RBP12.58□□□□□ -0.4
CAPN3-220ENST00000569827 PABPC1P11940 636 aaKnown RBP12.58□□□□□ -0.4
CAPN3-220ENST00000569827 LCP1P13796 627 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 CD19P15391 556 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
CAPN3-220ENST00000569827 HARS2P49590 506 aaKnown RBP12.58□□□□□ -0.4
CAPN3-220ENST00000569827 NDUFA8P51970 172 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 ZNF132P52740 706 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 LRMPQ12912 555 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 CBWD6Q4V339 395 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 DCAF17Q5H9S7 520 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-220ENST00000569827 CBWD3Q5JTY5 395 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 CBWD5Q5RIA9 395 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 BSPRYQ5W0U4 402 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 ARHGAP17Q68EM7 881 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 KRT39Q6A163 491 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 DBX2Q6ZNG2 339 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 ADAT2Q7Z6V5 191 aaKnown RBP12.58□□□□□ -0.4
CAPN3-220ENST00000569827 ARHGAP18Q8N392 663 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 ANKRD52Q8NB46 1076 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 FBXL13Q8NEE6 735 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 GANCQ8TET4 914 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 CLEC4CQ8WTT0 213 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 RNF139Q8WU17 664 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 ORAI3Q9BRQ5 295 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 SLC2A11Q9BYW1 496 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 BTBD1Q9H0C5 482 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 LRRC4Q9HBW1 653 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
CAPN3-220ENST00000569827 PLK4O00444 970 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 GABBR2O75899 941 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 RHOBTB3O94955 611 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 DNTTP04053 509 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 PRB1P04280 392 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 IGHV4-34P06331 123 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 CENPBP07199 599 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-220ENST00000569827 SYKP43405 635 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 GRIA4P48058 902 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 CCT8P50990 548 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 DPYDQ12882 1025 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 DNAJC3Q13217 504 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 TEAD4Q15561 434 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 KIF26BQ2KJY2 2108 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 ZCWPW2Q504Y3 356 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 TCERG1LQ5VWI1 586 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 PM20D1Q6GTS8 502 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms