RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 TBCBQ99426 244 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 IER2Q9BTL4 223 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 TRIM7Q9C029 511 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 SEMA4AQ9H3S1 761 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 EBF3Q9H4W6 596 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 HPS4Q9NQG7 708 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 STAP1Q9ULZ2 295 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 TLR6Q9Y2C9 796 aa13.38□□□□□ -0.27
CNEP1R1-211ENST00000569647 OTOL1A6NHN0 477 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 M0QYT0 321 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 ARHGAP6O43182 974 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 CCP110O43303 1012 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 KLKB1P03952 638 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 HMBSP08397 361 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 ARSAP15289 507 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 CORO1AP31146 461 aaKnown RBP13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 SDC4P31431 198 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 MAGEA1P43355 309 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 RUNX3Q13761 415 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 PON2Q15165 354 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 SPA17Q15506 151 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 C15orf59Q2T9L4 293 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 CC2D1AQ6P1N0 951 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 TSSK4Q6SA08 328 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 STRADAQ7RTN6 431 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 ACRBPQ8NEB7 543 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 PPP1R9BQ96SB3 815 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 CNPY3Q9BT09 278 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 NUP85Q9BW27 656 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 RBM12Q9NTZ6 932 aaKnown RBP13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 PIGVQ9NUD9 493 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 UVRAGQ9P2Y5 699 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
CNEP1R1-211ENST00000569647 SCAMP3O14828 347 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 MTA2O94776 668 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 LATS1O95835 1130 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 F9P00740 461 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 TDGF1P13385 188 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 GBP1P32455 592 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 CXCR3P49682 368 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 ATXN1P54253 815 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 ATP11AP98196 1134 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 NME3Q13232 169 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 CCINQ13939 588 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 LRRC32Q14392 662 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 PPP2R5DQ14738 602 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 TCEAL1Q15170 157 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 RAB6CQ53S08 254 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 SH3PXD2AQ5TCZ1 1133 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 NUGGCQ68CJ6 796 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 MAMSTRQ6ZN01 415 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 BBS7Q8IWZ6 715 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 FAM217AQ8IXS0 508 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 ZNF564Q8TBZ8 553 aaPredicted RBP13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 OSCP1Q8WVF1 389 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 RFFLQ8WZ73 363 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 NELL1Q92832 810 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 DCLK3Q9C098 648 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 RAB6CQ9H0N0 254 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 LUC7LQ9NQ29 371 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 LSM7Q9UK45 103 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 WNT6Q9Y6F9 365 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 EML5Q05BV3 1969 aa13.36□□□□□ -0.27
CNEP1R1-211ENST00000569647 SYNJ2BP-COX16A0A087WUM0 186 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 RCCD1A6NED2 376 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 KCNU1A8MYU2 1149 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 HARS2P49590 506 aaKnown RBP13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 CCR3P51677 355 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 VAV2P52735 878 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 HDAC4P56524 1084 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 SATB1Q01826 763 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 CCDC173Q0VFZ6 552 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 PDGFRLQ15198 375 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 CDO1Q16878 200 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 ZC3H12AQ5D1E8 599 aaKnown RBP13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 DGKKQ5KSL6 1271 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 Q6ZS52 159 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 UNC45BQ8IWX7 931 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 RHOT2Q8IXI1 618 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 ZBTB44Q8NCP5 570 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 FAM172AQ8WUF8 416 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 AZIN2Q96A70 460 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 DESI2Q9BSY9 194 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 LINC00597Q9H2U6 94 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 KCNF1Q9H3M0 494 aa13.35□□□□□ -0.27
CNEP1R1-211ENST00000569647 OSGEPQ9NPF4 335 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms