RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 SLC6A17Q9H1V8 727 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 PRMT8Q9NR22 394 aaPredicted RBP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 ZSCAN32Q9NX65 697 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 CALCOCO1Q9P1Z2 691 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 FBXO4Q9UKT5 387 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 TLR6Q9Y2C9 796 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 KIAA1549LQ6ZVL6 1849 aa9.37□□□□□ -0.91
GTF3C1-210ENST00000569394 USP34Q70CQ2 3546 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 TCRBV21S2A2A0A5A6 115 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 IRAK2O43187 625 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 HRO43593 1189 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 CACNG3O60359 315 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 DAB1O75553 588 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 CISD3P0C7P0 127 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 HLA-EP13747 358 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 FERP16591 822 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 TACR2P21452 398 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 HOXD9P28356 352 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 FLT3P36888 993 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 NSFP46459 744 aaKnown RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 SNX16P57768 344 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 CCDC6Q16204 474 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 CLEC16AQ2KHT3 1053 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 C15orf59Q2T9L4 293 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 FBXO43Q4G163 708 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 FAM133BQ5BKY9 247 aaKnown RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 SH3PXD2AQ5TCZ1 1133 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 SFMBT2Q5VUG0 894 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 E4F1Q66K89 784 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 ZC3H14Q6PJT7 736 aaKnown RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 LRSAM1Q6UWE0 723 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 MFN1Q8IWA4 741 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 PHTF2Q8N3S3 785 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 SYNPOQ8N3V7 929 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 DEFB119Q8N690 84 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 FRMD1Q8N878 549 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 MSANTD4Q8NCY6 345 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 JOSD2Q8TAC2 188 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 RLN3Q8WXF3 142 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC39A7Q92504 469 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 BAP1Q92560 729 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 PRICKLE1Q96MT3 831 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 HAUS4Q9H6D7 363 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 NPDC1Q9NQX5 325 aaPredicted RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 ABCB8Q9NUT2 735 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 TAS2R14Q9NYV8 317 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 ADAM22Q9P0K1 906 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 VANGL2Q9ULK5 521 aa9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 MYO18AQ92614 2054 aaKnown RBP9.36□□□□□ -0.91
GTF3C1-210ENST00000569394 PRR23AA6NEV1 266 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 AXIN1O15169 862 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SRGAP2O75044 1071 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 ADAM23O75077 832 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 PAGE1O75459 146 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 ADCY5O95622 1261 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 IGLV3-27P01718 113 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 CYP1A1P04798 512 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 HOXB2P14652 356 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 ABCB4P21439 1286 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 CD70P32970 193 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 CDH5P33151 784 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 NOS2P35228 1153 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 NBL1P41271 181 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 TNFRSF4P43489 277 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 KIR2DL1P43626 348 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 IRAK1P51617 712 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 FOXK2Q01167 660 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 CENPCQ03188 943 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 DEUP1Q05D60 604 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SIM2Q14190 667 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 MEA1Q16626 185 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 TDRD12Q587J7 1177 aaKnown RBP9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 FSCBQ5H9T9 825 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 MS4A13Q5J8X5 152 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 PIK3R6Q5UE93 754 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SDE2Q6IQ49 451 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 TRNP1Q6NT89 227 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 CHST9Q7L1S5 443 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SYT13Q7L8C5 426 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC26A9Q7LBE3 791 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 IRF2BP2Q7Z5L9 587 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 C14orf80Q86SX3 495 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 FAM131BQ86XD5 332 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 ZNF677Q86XU0 584 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 CPXM2Q8N436 756 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 ATP6V0D2Q8N8Y2 350 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 RXFP2Q8WXD0 754 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 ACDQ96AP0 544 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC39A13Q96H72 371 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 RPRD1AQ96P16 312 aaPredicted RBP9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SLC2A13Q96QE2 648 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 TRIM62Q9BVG3 475 aa9.35□□□□□ -0.91
GTF3C1-210ENST00000569394 SELENOOQ9BVL4 669 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms