RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CCDC194A0A1B0GVG4 234 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 LNP1A1A4G5 178 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 C22orf46C9J442 243 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 BIN1O00499 593 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 PODXLO00592 558 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 PLD2O14939 933 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 USO1O60763 962 aaKnown RBP6.12□□□□□ -1.43
CDH13-211ENST00000568770 AKAP3O75969 853 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 RASGRP1O95267 797 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 LYPLA2O95372 231 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 DEXIO95424 95 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 CAVIN2O95810 425 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 CEACAM1P13688 526 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 GCFC2P16383 781 aaKnown RBP6.12□□□□□ -1.43
CDH13-211ENST00000568770 RPS6KB1P23443 525 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 CORO7P57737 925 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 GPR85P60893 370 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 CREB5Q02930 508 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 LSAMPQ13449 338 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 CACNA1EQ15878 2313 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 MAPK6Q16659 721 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 DCAF4L1Q3SXM0 396 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 GON4LQ3T8J9 2241 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 CTXN3Q4LDR2 81 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 ARHGAP29Q52LW3 1261 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 DAB2IPQ5VWQ8 1189 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 BLOC1S2Q6QNY1 142 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 ARID3BQ8IVW6 561 aaPredicted RBP6.12□□□□□ -1.43
CDH13-211ENST00000568770 FBXL16Q8N461 479 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 INTS4Q96HW7 963 aaKnown RBP6.12□□□□□ -1.43
CDH13-211ENST00000568770 MRPL4Q9BYD3 311 aaKnown RBP6.12□□□□□ -1.43
CDH13-211ENST00000568770 AGXT2Q9BYV1 514 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 ANAPC1Q9H1A4 1944 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 C2orf40Q9H1Z8 148 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 TNFRSF12AQ9NP84 129 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 POLR3BQ9NW08 1133 aaPredicted RBP6.12□□□□□ -1.43
CDH13-211ENST00000568770 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDH13-211ENST00000568770 PCDHA12Q9UN75 941 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 SLC8A2Q9UPR5 921 aa6.12□□□□□ -1.43
CDH13-211ENST00000568770 BCLAF3A2AJT9 711 aaKnown RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 TAF4O00268 1085 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ACKR2O00590 384 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 SYN3O14994 580 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 DCLK1O15075 740 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ATG13O75143 517 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 RHOBTB1O94844 696 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 BAG4O95429 457 aaKnown RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 VNN2O95498 520 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 NTRK1P04629 796 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 GLI4P10075 376 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 JUNBP17275 347 aaPredicted RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 CSRP1P21291 193 aaKnown RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 EVCP57679 992 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ERVFRD-1P60508 538 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ELF2Q15723 593 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ITPRIPL2Q3MIP1 535 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 TMEM196Q5HYL7 178 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ADGRF1Q5T601 910 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ATF7IP2Q5U623 682 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 BICRALQ6AI39 1079 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ALKAL1Q6UXT8 129 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 PIK3AP1Q6ZUJ8 805 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 MAMDC2Q7Z304 686 aaPredicted RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 HAUS6Q7Z4H7 955 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 BRAPQ7Z569 592 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 KIAA0907Q7Z7F0 614 aaPredicted RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 TMC8Q8IU68 726 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 Q8N1Y9 231 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 CAMKK1Q8N5S9 505 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 MCPH1Q8NEM0 835 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ZMAT2Q96NC0 199 aaKnown RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 TMEM209Q96SK2 561 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 ZFYVE21Q9BQ24 234 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 TMEM9BQ9NQ34 198 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 AFF4Q9UHB7 1163 aaKnown RBP6.11□□□□□ -1.43
CDH13-211ENST00000568770 SFMBT1Q9UHJ3 866 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 KLK13Q9UKR3 277 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 MAFFQ9ULX9 164 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 NUB1Q9Y5A7 615 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 SNX14Q9Y5W7 946 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 X6R8D5 127 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 MYOFQ9NZM1 2061 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 MAST4O15021 2626 aa6.11□□□□□ -1.43
CDH13-211ENST00000568770 MYO18AQ92614 2054 aaKnown RBP6.1□□□□□ -1.43
CDH13-211ENST00000568770 SCN1AP35498 2009 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 ZC3H12DA2A288 527 aaKnown RBP6.1□□□□□ -1.43
CDH13-211ENST00000568770 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
CDH13-211ENST00000568770 PATE3B3GLJ2 98 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 CDX4O14627 284 aaPredicted RBP6.1□□□□□ -1.43
CDH13-211ENST00000568770 CPLX1O14810 134 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 DNAJC8O75937 253 aaPredicted RBP6.1□□□□□ -1.43
CDH13-211ENST00000568770 PRAMEF12O95522 483 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 EGFP01133 1207 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 DBHP09172 617 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 OR4Q2P0C623 313 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 XRCC6P12956 609 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDH13-211ENST00000568770 NAMPTP43490 491 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 EPHB3P54753 998 aa6.1□□□□□ -1.43
CDH13-211ENST00000568770 OSTNP61366 133 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms