RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 HFE2Q6ZVN8 426 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 OR10T2Q8NGX3 314 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 BADQ92934 168 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 CORO1BQ9BR76 489 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 CERS4Q9HA82 394 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 WHRNQ9P202 907 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 INSL6Q9Y581 213 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 MAGEA4P43358 317 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 CDH18Q13634 790 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 PCSK7Q16549 785 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 PABPC1LQ4VXU2 614 aaKnown RBP12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 VSIG1Q86XK7 387 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 CCDC185Q8N715 623 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 PPM1NQ8N819 430 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 PCDH9Q9HC56 1237 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 IPO11Q9UI26 975 aaKnown RBP12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 PLXNB2O15031 1838 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 SPTBN2O15020 2390 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 A0A087WUV0 522 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 CLGNO14967 610 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 TIMP1P01033 207 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 CDKN2BP42772 138 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 RAP1GAP2Q684P5 730 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 CCSAPQ6IQ19 270 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 RNF135Q8IUD6 432 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 LGI2Q8N0V4 545 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PYROXD2Q8N2H3 581 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 ANKLE1Q8NAG6 615 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 IRGQQ8WZA9 623 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 ATP2A3Q93084 1043 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 NSRP1Q9H0G5 558 aaKnown RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 DNMT3LQ9UJW3 386 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PFKMP08237 780 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 FAM153BP0C7A2 387 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 ERCC2P18074 760 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 HDCP19113 662 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 IL1R2P27930 398 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 GJA8P48165 433 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 NR2C2P49116 596 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 GPR15P49685 360 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 CREMQ03060 361 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 THOC5Q13769 683 aaKnown RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 SLC29A2Q14542 456 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 FAM153CQ494X1 144 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 RFX8Q6ZV50 586 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 ST13P5Q8NFI4 369 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 DDI1Q8WTU0 396 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 KLF6Q99612 283 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 APOL5Q9BWW9 433 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 OXCT2Q9BYC2 517 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 IGFLR1Q9H665 355 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PAK6Q9NQU5 681 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PCYOX1Q9UHG3 505 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 FAM153AQ9UHL3 310 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PRR23AA6NEV1 266 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 AGRPO00253 132 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 ZNF189O75820 626 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 OR1E1P30953 314 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PTP4A2Q12974 167 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 DCAF12L1Q5VU92 463 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 NUGGCQ68CJ6 796 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 RTN4RL1Q86UN2 441 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 TAC4Q86UU9 113 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 BCAS4Q8TDM0 211 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 TEKT4Q8WW24 435 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 HTR3CQ8WXA8 447 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 KCTD13Q8WZ19 329 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 IGSF21Q96ID5 467 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 SPATA17Q96L03 361 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 FCRL2Q96LA5 508 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 SLC8A2Q9UPR5 921 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 MYH10P35580 1976 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 GLUD1P00367 558 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 RECQLP46063 649 aaPredicted RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 TRADDQ15628 312 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 RASSF4Q9H2L5 321 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 ZC3H7BQ9UGR2 993 aaKnown RBP12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 DPP7Q9UHL4 492 aa12.51□□□□□ -0.41
TMEM170A-205ENST00000568559 PMPCBO75439 489 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 MT-ND3P03897 115 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 HSD17B3P37058 310 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 MNAT1P51948 309 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 TWF1Q12792 350 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 HABP4Q5JVS0 413 aaKnown RBP12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 ZIM3Q96PE6 472 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 TCF25Q9BQ70 676 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 FUT8Q9BYC5 575 aa12.5□□□□□ -0.41
TMEM170A-205ENST00000568559 GDF3Q9NR23 364 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms