RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 RNF139Q8WU17 664 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 SORCS1Q8WY21 1168 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 KCTD13Q8WZ19 329 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 TMA16Q96EY4 203 aaKnown RBP15.71■□□□□ 0.11
COMMD4-223ENST00000568301 IPO9Q96P70 1041 aaKnown RBP15.71■□□□□ 0.11
COMMD4-223ENST00000568301 TMEM245Q9H330 911 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 HESX1Q9UBX0 185 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 TSPAN16Q9UKR8 245 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 KIAA1257Q9ULG3 409 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 PLA2G4CQ9UP65 541 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 RAXQ9Y2V3 346 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 NUMA1Q14980 2115 aa15.71■□□□□ 0.11
COMMD4-223ENST00000568301 TULP2O00295 520 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 LATS1O95835 1130 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 HLA-FP30511 346 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 YWHAEP62258 255 aaKnown RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 BST2Q10589 180 aaKnown RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 GOLGA7BQ2TAP0 167 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 CBWD6Q4V339 395 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 CBWD3Q5JTY5 395 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 CBWD5Q5RIA9 395 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 DBX2Q6ZNG2 339 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 KIAA0907Q7Z7F0 614 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 MARCH9Q86YJ5 346 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 SMYD4Q8IYR2 804 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 SCML4Q8N228 414 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 WFIKKN2Q8TEU8 576 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 NDRG1Q92597 394 aaKnown RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 IRX2Q9BZI1 471 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 GOLPH3LQ9H4A5 285 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 GAREM1Q9H706 876 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 ABCC13Q9NSE7 274 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 RMND1Q9NWS8 449 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 TOR4AQ9NXH8 423 aa15.7■□□□□ 0.1
COMMD4-223ENST00000568301 KIAA1522Q9P206 1035 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 EIF2B4Q9UI10 523 aaKnown RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 FNDC3AQ9Y2H6 1198 aaKnown RBP15.7■□□□□ 0.1
COMMD4-223ENST00000568301 URB1O60287 2271 aaKnown RBP15.69■□□□□ 0.1
COMMD4-223ENST00000568301 YJEFN3A6XGL0 299 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 E7ENQ6 273 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 SLC16A3O15427 465 aaKnown RBP15.69■□□□□ 0.1
COMMD4-223ENST00000568301 CER1O95813 267 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 VDRP11473 427 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 PRCPP42785 496 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 FKBP3Q00688 224 aaKnown RBP15.69■□□□□ 0.1
COMMD4-223ENST00000568301 ADIGQ0VDE8 80 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 COBLL1Q53SF7 1204 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 MPP7Q5T2T1 576 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 TCERG1LQ5VWI1 586 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 ZC3H3Q8IXZ2 948 aaKnown RBP15.69■□□□□ 0.1
COMMD4-223ENST00000568301 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.69■□□□□ 0.1
COMMD4-223ENST00000568301 BBC3Q96PG8 261 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-223ENST00000568301 FBRSQ9HAH7 460 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 CNGB3Q9NQW8 809 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 TM7SF3Q9NS93 570 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 PCDHGB2Q9Y5G2 931 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 KALRNO60229 2985 aa15.69■□□□□ 0.1
COMMD4-223ENST00000568301 TSPAN3O60637 253 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 SETSIPP0DME0 302 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 CD19P15391 556 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 TBXAS1P24557 533 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-223ENST00000568301 MATKP42679 507 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 ZBTB16Q05516 673 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 HLA-BQ31612 363 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 PKDCCQ504Y2 493 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 ZNF658Q5TYW1 1059 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-223ENST00000568301 CHST9Q7L1S5 443 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 TMPRSS7Q7RTY8 843 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 ADIPOR2Q86V24 386 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 AHI1Q8N157 1196 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 SIX6OS1Q8N1H7 587 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 UBA3Q8TBC4 463 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 BAHD1Q8TBE0 780 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-223ENST00000568301 EDEM1Q92611 657 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 LRIG1Q96JA1 1093 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 GSDMAQ96QA5 445 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 TSG101Q99816 390 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 LHX5Q9H2C1 402 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 OSGEPQ9NPF4 335 aa15.68■□□□□ 0.1
COMMD4-223ENST00000568301 GOLGA4Q13439 2230 aaKnown RBP15.68■□□□□ 0.1
COMMD4-223ENST00000568301 O00370 1275 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 ATP5BP06576 529 aaKnown RBP15.67■□□□□ 0.1
COMMD4-223ENST00000568301 DLDP09622 509 aaKnown RBP15.67■□□□□ 0.1
COMMD4-223ENST00000568301 ATXN1LP0C7T5 689 aaKnown RBP15.67■□□□□ 0.1
COMMD4-223ENST00000568301 PABPC1P11940 636 aaKnown RBP15.67■□□□□ 0.1
COMMD4-223ENST00000568301 HLA-EP13747 358 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 ACSL1P33121 698 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 AFF3P51826 1226 aaKnown RBP15.67■□□□□ 0.1
COMMD4-223ENST00000568301 DAOAP59103 153 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 PTPRNQ16849 979 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 FNDC3BQ53EP0 1204 aaKnown RBP15.67■□□□□ 0.1
COMMD4-223ENST00000568301 DCAF17Q5H9S7 520 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-223ENST00000568301 ANKRD40Q6AI12 368 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 MSANTD2Q6P1R3 559 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 LCLAT1Q6UWP7 414 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 FAM124AQ86V42 546 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 UNC45BQ8IWX7 931 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 UBR7Q8N806 425 aa15.67■□□□□ 0.1
COMMD4-223ENST00000568301 ZNF557Q8N988 423 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms