RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DHPSP49366 369 aaPredicted RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 TBX4P57082 545 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 RPL6Q02878 288 aaKnown RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 ARID5AQ03989 594 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 PDCLQ13371 301 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 ENPP2Q13822 863 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 STARD3Q14849 445 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 ARHGAP44Q17R89 818 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 VWA3BQ502W6 1294 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 MPP7Q5T2T1 576 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 STPG1Q5TH74 334 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 IL31Q6EBC2 164 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 DENND1BQ6P3S1 775 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 GJB7Q6PEY0 223 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 SLC36A4Q6YBV0 504 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 CYP2U1Q7Z449 544 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 KIAA0907Q7Z7F0 614 aaPredicted RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 TMEM110Q86TL2 294 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 SCUBE3Q8IX30 993 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 ZNF557Q8N988 423 aaPredicted RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 WFIKKN2Q8TEU8 576 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 RLN3Q8WXF3 142 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 SHC3Q92529 594 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 FAM149B1Q96BN6 582 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 TMA16Q96EY4 203 aaKnown RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 MRGPRX1Q96LB2 322 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 SERPINB11Q96P15 392 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 ACOX2Q99424 681 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 DDX50Q9BQ39 737 aaKnown RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 TUBGCP2Q9BSJ2 902 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 LHX5Q9H2C1 402 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 NDST4Q9H3R1 872 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 POPDC2Q9HBU9 364 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 LMBRD1Q9NUN5 540 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 ELOVL2Q9NXB9 296 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 CACNA2D2Q9NY47 1150 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 CALCOCO1Q9P1Z2 691 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 THAP10Q9P2Z0 257 aaPredicted RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 MBD1Q9UIS9 605 aaPredicted RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 PCDHGC3Q9UN70 934 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 TLR6Q9Y2C9 796 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 RAD54BQ9Y620 910 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 STON1Q9Y6Q2 735 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 SDK1Q7Z5N4 2213 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 PCDH15Q96QU1 1955 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 DOCK4Q8N1I0 1966 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 IGHV1OR15-9A0A0B4J2B8 117 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 MED19A0JLT2 244 aaPredicted RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 LNP1A1A4G5 178 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 TYW5A2RUC4 315 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 KCNJ18B7U540 433 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 WASH3PC4AMC7 463 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PAPSS1O43252 624 aaPredicted RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 ACSL4O60488 711 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SYNCRIPO60506 623 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 TSPAN3O60637 253 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 TBL1XO60907 577 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 IGLV3-25P01717 112 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 APOEP02649 317 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 ATP5BP06576 529 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 GLI1P08151 1106 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 EEF1GP26641 437 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 HLA-FP30511 346 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SLC6A4P31645 630 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 IL12RB1P42701 662 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PTGER3P43115 390 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SGSHP51688 502 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SNX16P57768 344 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 BPIFB4P59827 614 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 YWHAZP63104 245 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 APBA1Q02410 837 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PTK2Q05397 1052 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 LMAN2Q12907 356 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 KCNJ12Q14500 433 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 ZNF234Q14588 700 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 FUT11Q495W5 492 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 FAM133BQ5BKY9 247 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 EFHC1Q5JVL4 640 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 MIIPQ5JXC2 388 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PIK3R6Q5UE93 754 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PEAR1Q5VY43 1037 aaPredicted RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 LYSMD4Q5XG99 296 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 TMEM215Q68D42 235 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 RNF43Q68DV7 783 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 TCEAL6Q6IPX3 200 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 KIAA1211LQ6NV74 962 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 RFWD3Q6PCD5 774 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SLC23A3Q6PIS1 610 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SERPINA13PQ6UXR4 307 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 RABEPKQ7Z6M1 372 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 METTL3Q86U44 580 aaKnown RBP4.97□□□□□ -1.61
CLK3-219ENST00000567805 TAC4Q86UU9 113 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 SYT12Q8IV01 421 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 PARP9Q8IXQ6 854 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 TMEFF1Q8IYR6 380 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 AHI1Q8N157 1196 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 FRMD1Q8N878 549 aa4.97□□□□□ -1.61
CLK3-219ENST00000567805 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLK3-219ENST00000567805 HJURPQ8NCD3 748 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms