RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 EML5Q05BV3 1969 aa17.86■□□□□ 0.45
COMMD4-220ENST00000567720 ANTXRLA6NF34 631 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 CHRM1P11229 460 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-220ENST00000567720 PDGFRAP16234 1089 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 GPD1P21695 349 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 DRD1P21728 446 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 SDC4P31431 198 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 GGCXP38435 758 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 CXCR3P49682 368 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 OGDHQ02218 1023 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 DEUP1Q05D60 604 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 GFPT1Q06210 699 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-220ENST00000567720 GRSF1Q12849 480 aaKnown RBP eCLIP17.85■□□□□ 0.45
COMMD4-220ENST00000567720 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-220ENST00000567720 SH3PXD2AQ5TCZ1 1133 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 RAP1GAP2Q684P5 730 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 RNF43Q68DV7 783 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 CHSY1Q86X52 802 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 ATP6V0D2Q8N8Y2 350 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 CHP1Q99653 195 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 LMAN1LQ9HAT1 526 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 ARHGEF4Q9NR80 690 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 ARHGEF38Q9NXL2 777 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 CNOT8Q9UFF9 292 aaKnown RBP17.85■□□□□ 0.45
COMMD4-220ENST00000567720 CLEC4EQ9ULY5 219 aa17.85■□□□□ 0.45
COMMD4-220ENST00000567720 CHD5Q8TDI0 1954 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 MYO15AQ9UKN7 3530 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 VPS13AQ96RL7 3174 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 SSU72P8A0A1W2PR75 194 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-220ENST00000567720 NCAM2O15394 837 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 CCP110O43303 1012 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 RNF40O75150 1001 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 ENDOD1O94919 500 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 KAT7O95251 611 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 ADCY5O95622 1261 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 CYBBP04839 570 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 SLC2A3P11169 496 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 ABCB4P21439 1286 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 MAGEA9P43362 315 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 ZNF252P-AS1Q0IIN9 211 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 MAMLD1Q13495 774 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 MPPE1Q53F39 396 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 MS4A13Q5J8X5 152 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 DGKKQ5KSL6 1271 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 BRMS1LQ5PSV4 323 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 PKN3Q6P5Z2 889 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 ALKBH5Q6P6C2 394 aaKnown RBP17.84■□□□□ 0.45
COMMD4-220ENST00000567720 FAM131BQ86XD5 332 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 TERB1Q8NA31 727 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 DTWD2Q8NBA8 298 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 DDI1Q8WTU0 396 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 RNF34Q969K3 372 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 TRIM11Q96F44 468 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 PNKPQ96T60 521 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 PRMT1Q99873 361 aaKnown RBP17.84■□□□□ 0.45
COMMD4-220ENST00000567720 TRIM7Q9C029 511 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 TMPRSS4Q9NRS4 437 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 ZNHIT6Q9NWK9 470 aaKnown RBP17.84■□□□□ 0.45
COMMD4-220ENST00000567720 DMDP11532 3685 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 CKAP5Q14008 2032 aa17.84■□□□□ 0.45
COMMD4-220ENST00000567720 PAGE1O75459 146 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 MYBL1P10243 752 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 TACR2P21452 398 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 HDAC4P56524 1084 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 RPS24P62847 133 aaKnown RBP17.83■□□□□ 0.44
COMMD4-220ENST00000567720 SLC18A3Q16572 532 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 GRAMD4Q6IC98 578 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 STRADAQ7RTN6 431 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 HJURPQ8NCD3 748 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-220ENST00000567720 WFDC5Q8TCV5 224 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 FAM172AQ8WUF8 416 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 CENPIQ92674 756 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-220ENST00000567720 EXOC4Q96A65 974 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 XPO6Q96QU8 1125 aaKnown RBP17.83■□□□□ 0.44
COMMD4-220ENST00000567720 TKTL2Q9H0I9 626 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 THAP2Q9H0W7 228 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 PARVAQ9NVD7 372 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 DEC1Q9P2X7 70 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 FBXO10Q9UK96 956 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 HS3ST4Q9Y661 456 aa17.83■□□□□ 0.44
COMMD4-220ENST00000567720 K7EQS6 105 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 F9P00740 461 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 APODP05090 189 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 CISD3P0C7P0 127 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 CDC25BP30305 580 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 GRIA2P42262 883 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 DGKGP49619 791 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 IRAK1P51617 712 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 ZNF143P52747 638 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-220ENST00000567720 MTAPQ13126 283 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 TSR1Q2NL82 804 aaKnown RBP17.82■□□□□ 0.44
COMMD4-220ENST00000567720 CCDC122Q5T0U0 273 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 DCUN1D2Q6PH85 259 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 SND1Q7KZF4 910 aaKnown RBP eCLIP17.82■□□□□ 0.44
COMMD4-220ENST00000567720 LGI2Q8N0V4 545 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 PRSS33Q8NF86 280 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 ARHGEF26Q96DR7 871 aa17.82■□□□□ 0.44
COMMD4-220ENST00000567720 DDX50Q9BQ39 737 aaKnown RBP17.82■□□□□ 0.44
COMMD4-220ENST00000567720 PACSIN1Q9BY11 444 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms