RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 NTPCRQ9BSD7 190 aaKnown RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 MSTO1Q9BUK6 570 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 HAPLN2Q9GZV7 340 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 TMEM60Q9H2L4 133 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 CUEDC1Q9NWM3 386 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 ELOVL2Q9NXB9 296 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 CELSR1Q9NYQ6 3014 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 PLK2Q9NYY3 685 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 DKK3Q9UBP4 350 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 RCOR1Q9UKL0 485 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 VPS4AQ9UN37 437 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 PDZD2O15018 2839 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 A0A1W2PR77 199 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 F8VP50 259 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 TIMM44O43615 452 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 RTN2O75298 545 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 DDAH2O95865 285 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 BMP15O95972 392 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 MAPTP10636 758 aaKnown RBP10.19□□□□□ -0.78
CAPN3-216ENST00000567071 LIPCP11150 499 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 TUBP50607 506 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 MFAP3P55082 362 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 SLC39A14Q15043 492 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 CCDC142Q17RM4 750 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 FNDC3BQ53EP0 1204 aaKnown RBP10.19□□□□□ -0.78
CAPN3-216ENST00000567071 ZNF776Q68DI1 518 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-216ENST00000567071 FAM171BQ6P995 826 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 DAW1Q8N136 415 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 TMEM161BQ8NDZ6 487 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 TPCN2Q8NHX9 752 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 PRR11Q96HE9 360 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-216ENST00000567071 C8orf48Q96LL4 319 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 TIPINQ9BVW5 301 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 CYLDQ9NQC7 956 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 LMBRD1Q9NUN5 540 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 CDH9Q9ULB4 789 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 SCML1Q9UN30 329 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 PCDHB11Q9Y5F2 797 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 PCDHGA7Q9Y5G6 932 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 ENTPD2Q9Y5L3 495 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 SPG11Q96JI7 2443 aa10.19□□□□□ -0.78
CAPN3-216ENST00000567071 A0A1B0GTL3 188 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 FFAR2O15552 330 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 SLC5A2P31639 672 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 HARS2P49590 506 aaKnown RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 GALCP54803 685 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 POLE2P56282 527 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 RPS14P62263 151 aaKnown RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 OVGP1Q12889 678 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 GEN1Q17RS7 908 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 NCEH1Q6PIU2 408 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 USP30Q70CQ3 517 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 C4orf32Q8N8J7 132 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 MFSD2AQ8NA29 543 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 OR2T34Q8NGX1 318 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 C9orf43Q8TAL5 461 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 IFI44Q8TCB0 444 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 CLIC6Q96NY7 704 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 CCSER2Q9H7U1 834 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 FBXO2Q9UK22 296 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 FBXO10Q9UK96 956 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 CPSF3Q9UKF6 684 aaKnown RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 PCDHA7Q9UN72 937 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 PLA2G4CQ9UP65 541 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 KIAA1024Q9UPX6 916 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 R3HCC1Q9Y3T6 440 aaKnown RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 SVILO95425 2214 aa10.18□□□□□ -0.78
CAPN3-216ENST00000567071 TDRD6O60522 2096 aaKnown RBP10.18□□□□□ -0.78
CAPN3-216ENST00000567071 HIVEP1P15822 2718 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 A0A1W2PNU3 283 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-216ENST00000567071 VWA3AA6NCI4 1184 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 GOLGA6L4A6NEF3 574 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 SFI1A8K8P3 1242 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 RNASEH1O60930 286 aaKnown RBP10.17□□□□□ -0.78
CAPN3-216ENST00000567071 PPP6R2O75170 966 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 TCEA3O75764 348 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 PLS3P13797 630 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 COL8A1P27658 744 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 CDC25AP30304 524 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 POLR2BP30876 1174 aaKnown RBP10.17□□□□□ -0.78
CAPN3-216ENST00000567071 CCR5P51681 352 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 PSMC1P62191 440 aaKnown RBP10.17□□□□□ -0.78
CAPN3-216ENST00000567071 CYP4F2P78329 520 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 ORC2Q13416 577 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-216ENST00000567071 PDAP1Q13442 181 aaKnown RBP10.17□□□□□ -0.78
CAPN3-216ENST00000567071 TGIF1Q15583 401 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 IL17AQ16552 155 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 NAPEPLDQ6IQ20 393 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 HS2ST1Q7LGA3 356 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 DSG4Q86SJ6 1040 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 IQCHQ86VS3 1027 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 HEATR4Q86WZ0 1026 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 NT5DC4Q86YG4 428 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 NUP93Q8N1F7 819 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 TOP6BLQ8N6T0 577 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 EFCAB3Q8N7B9 438 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 WDR48Q8TAF3 677 aa10.17□□□□□ -0.78
CAPN3-216ENST00000567071 DUSP23Q9BVJ7 150 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms