RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ERCC2P18074 760 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 COPAP53621 1224 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 XRCC4Q13426 336 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 TARBP2Q15633 366 aaKnown RBP11.9□□□□□ -0.5
CDH1-210ENST00000566612 MSS51Q4VC12 460 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 NOL9Q5SY16 702 aaKnown RBP11.9□□□□□ -0.5
CDH1-210ENST00000566612 CCNJLQ8IV13 435 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 CMTM5Q96DZ9 223 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 HSFY1Q96LI6 401 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 FICDQ9BVA6 458 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 CATSPERBQ9H7T0 1116 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 RBM22Q9NW64 420 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH1-210ENST00000566612 OR12D3Q9UGF7 316 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 A0A096LPK6 155 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 TRDMT1O14717 391 aaKnown RBP11.9□□□□□ -0.5
CDH1-210ENST00000566612 UPP2O95045 317 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 MMP3P08254 477 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 SMPD1P17405 629 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 GP5P40197 560 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 SLC1A6P48664 564 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 CDK16Q00536 496 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 TRIP10Q15642 601 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 LAYNQ6UX15 382 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 SCUBE1Q8IWY4 988 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 P2RY11Q96G91 374 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 BTBD10Q9BSF8 475 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 MAGEB5Q9BZ81 275 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 ILKAPQ9H0C8 392 aaPredicted RBP11.9□□□□□ -0.5
CDH1-210ENST00000566612 DCLRE1BQ9H816 532 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 LGALS13Q9UHV8 139 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 GPR182O15218 404 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 VAPBO95292 243 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 MATKP42679 507 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 YWHAHQ04917 246 aaPredicted RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 KLC1Q07866 573 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 SLC20A2Q08357 652 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 C10orf120Q5SQS8 335 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 OVOS1Q6IE37 1185 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 UNC5AQ6ZN44 842 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 DDIASQ8IXT1 998 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 WDTC1Q8N5D0 677 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 BHMTQ93088 406 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 PDLIM7Q9NR12 457 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 ANGPTL3Q9Y5C1 460 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 GOLGB1Q14789 3259 aaKnown RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 C5orf60A6NFR6 353 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 PHGDHO43175 533 aaKnown RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 FBXO21O94952 628 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 EDN1P05305 212 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 GFAPP14136 432 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 DARSP14868 501 aaKnown RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 NDUFV1P49821 464 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 MAP3K10Q02779 954 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 TNS4Q8IZW8 715 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 XPNPEP3Q9NQH7 507 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 COL22A1Q8NFW1 1626 aaPredicted RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 UBTFL6P0CB48 400 aaPredicted RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 ENPEPQ07075 957 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 ARHGAP1Q07960 439 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 EFEMP1Q12805 493 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 KLF1Q13351 362 aaPredicted RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 LACTB2Q53H82 288 aaPredicted RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 ANKS1BQ7Z6G8 1248 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 ALYREFQ86V81 257 aaKnown RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 CHSY1Q86X52 802 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 LRRC52Q8N7C0 313 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 LRRC39Q96DD0 335 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 PIWIL1Q96J94 861 aaKnown RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 THAP1Q9NVV9 213 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 DLGAP2Q9P1A6 1054 aa11.89□□□□□ -0.51
CDH1-210ENST00000566612 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 XIRP1Q702N8 1843 aaKnown RBP11.89□□□□□ -0.51
CDH1-210ENST00000566612 ASMTLO95671 621 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 SERPINB8P50452 374 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 NUDT2P50583 147 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 KPNB1Q14974 876 aaKnown RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 OASLQ15646 514 aaKnown RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 TMEM154Q6P9G4 183 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 TRMT10BQ6PF06 316 aaKnown RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 DRICH1Q6PGQ1 229 aaPredicted RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 CMC1Q7Z7K0 106 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 SLC44A1Q8WWI5 657 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 ZBED3Q96IU2 234 aaPredicted RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 NENFQ9UMX5 172 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 LYPLA1O75608 230 aaPredicted RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 PGAM1P18669 254 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 SNX17Q15036 470 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 TCEAL1Q15170 157 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 RBBP5Q15291 538 aaKnown RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 KCNMB4Q86W47 210 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 TTC30AQ86WT1 665 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 EFHBQ8N7U6 833 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 CMASQ8NFW8 434 aaPredicted RBP11.88□□□□□ -0.51
CDH1-210ENST00000566612 BLOC1S5Q8TDH9 187 aa11.88□□□□□ -0.51
CDH1-210ENST00000566612 MCRS1Q96EZ8 462 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms