RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 NECAB3Q96P71 396 aaPredicted RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 TRMT61BQ9BVS5 477 aaKnown RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 TSGA10Q9BZW7 698 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.91□□□□□ -0.5
KARS-207ENST00000566560 DUS2Q9NX74 493 aaKnown RBP11.91□□□□□ -0.5
KARS-207ENST00000566560 TBC1D14Q9P2M4 693 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 LCMT1Q9UIC8 334 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 ZNF510Q9Y2H8 683 aa11.91□□□□□ -0.5
KARS-207ENST00000566560 A0A0U1RQJ8 604 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 MACROD2A1Z1Q3 448 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 BTNL10A8MVZ5 291 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 PJA2O43164 708 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 GREM1O60565 184 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 LRCH4O75427 683 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 RNF8O76064 485 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 ENDOD1O94919 500 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 LATS1O95835 1130 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 KLKB1P03952 638 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 NOP2P46087 812 aaKnown RBP11.9□□□□□ -0.5
KARS-207ENST00000566560 SLC11A2P49281 568 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 CXCR3P49682 368 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 VCPP55072 806 aaKnown RBP11.9□□□□□ -0.5
KARS-207ENST00000566560 MTA1Q13330 715 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 TCEAL1Q15170 157 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 PDGFRLQ15198 375 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 RAB6CQ53S08 254 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 TRIM68Q6AZZ1 485 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 CHSY1Q86X52 802 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 GJD3Q8N144 294 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 NIPA2Q8N8Q9 360 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 ATP6V0D2Q8N8Y2 350 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 ATRIPQ8WXE1 791 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 BTN2A3PQ96KV6 586 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 LACRTQ9GZZ8 138 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 TKTL2Q9H0I9 626 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 RAB6CQ9H0N0 254 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 WDCPQ9H6R7 721 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 BRD9Q9H8M2 597 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 ARHGEF38Q9NXL2 777 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 TRIM10Q9UDY6 481 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 SLC12A6Q9UHW9 1150 aa11.9□□□□□ -0.5
KARS-207ENST00000566560 AGO1Q9UL18 857 aaKnown RBP11.9□□□□□ -0.5
KARS-207ENST00000566560 KIAA1549LQ6ZVL6 1849 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 KCNU1A8MYU2 1149 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 CHADO15335 359 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 BUB1O43683 1085 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 ACSL4O60488 711 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 PROSCO94903 275 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 NFATC1O95644 943 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 ARSAP15289 507 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 MAN1A1P33908 653 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 HADHBP55084 474 aaKnown RBP11.89□□□□□ -0.51
KARS-207ENST00000566560 NAP1L1P55209 391 aaKnown RBP11.89□□□□□ -0.51
KARS-207ENST00000566560 TDGQ13569 410 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 MESDQ14696 234 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 ACAP1Q15027 740 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 EML3Q32P44 896 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 ARL13BQ3SXY8 428 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 DAB2IPQ5VWQ8 1189 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 RNF135Q8IUD6 432 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 SLC44A3Q8N4M1 653 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 ATP2A3Q93084 1043 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 NTAN1Q96AB6 310 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 OTUB2Q96DC9 234 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
KARS-207ENST00000566560 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 EBF3Q9H4W6 596 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 XPO7Q9UIA9 1087 aaKnown RBP11.89□□□□□ -0.51
KARS-207ENST00000566560 DUSP12Q9UNI6 340 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 SORCS3Q9UPU3 1222 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 PPP2R2CQ9Y2T4 447 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 MYOFQ9NZM1 2061 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
KARS-207ENST00000566560 ARNTLO00327 626 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 NARSO43776 548 aaKnown RBP11.88□□□□□ -0.51
KARS-207ENST00000566560 KRT86O43790 486 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 PRPSAP2O60256 369 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 PAGE1O75459 146 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 ADH1CP00326 375 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 CYP17A1P05093 508 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 SRFP11831 508 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 MIPP30301 263 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 PCK1P35558 622 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 GJC1P36383 396 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 GGCXP38435 758 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 ARHGAP25P42331 645 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 SSR1P43307 286 aaKnown RBP11.88□□□□□ -0.51
KARS-207ENST00000566560 PTPN5P54829 565 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 TNK2Q07912 1038 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
KARS-207ENST00000566560 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
KARS-207ENST00000566560 MS4A13Q5J8X5 152 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 EFHC2Q5JST6 749 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 PIK3R6Q5UE93 754 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 RAP1GAP2Q684P5 730 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 NADSYN1Q6IA69 706 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 C11orf63Q6NUN7 778 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms