RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 USP30Q70CQ3 517 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 ADIPOR2Q86V24 386 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 CACTIN-AS1Q8N1I8 211 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 GOLGA1Q92805 767 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 JAKMIP2Q96AA8 810 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 CIPCQ9C0C6 399 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
RNF40-208ENST00000565995 PRSS16Q9NQE7 514 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 MARCH2Q9P0N8 246 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 RASAL2Q9UJF2 1139 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 SCML1Q9UN30 329 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 PLA2G4CQ9UP65 541 aa13.34□□□□□ -0.27
RNF40-208ENST00000565995 KCNK3O14649 394 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 POLR2DO15514 142 aaKnown RBP13.33□□□□□ -0.28
RNF40-208ENST00000565995 YEATS4O95619 227 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 LATS1O95835 1130 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 IGHV4-34P06331 123 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 BCAT1P54687 386 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 STK4Q13043 487 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 KIAA0895Q8NCT3 520 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 SNX19Q92543 992 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 NXPE2Q96DL1 559 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 NRSN2Q9GZP1 204 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 BLZF1Q9H2G9 400 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 FTSJ1Q9UET6 329 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 SUN2Q9UH99 717 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 STRIP2Q9ULQ0 834 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 MYO18BQ8IUG5 2567 aa13.33□□□□□ -0.28
RNF40-208ENST00000565995 A0A1W2PPC4 97 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 PLK4O00444 970 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 HMBSP08397 361 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 ITPKBP27987 946 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 PIK3CAP42336 1068 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
RNF40-208ENST00000565995 ARID5AQ03989 594 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 NFIL3Q16649 462 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 ADGRF1Q5T601 910 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 ZC3H3Q8IXZ2 948 aaKnown RBP13.32□□□□□ -0.28
RNF40-208ENST00000565995 TTC39CQ8N584 583 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 TSC1Q92574 1164 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 RSPH9Q9H1X1 276 aaPredicted RBP13.32□□□□□ -0.28
RNF40-208ENST00000565995 OLA1Q9NTK5 396 aaKnown RBP13.32□□□□□ -0.28
RNF40-208ENST00000565995 HBS1LQ9Y450 684 aaKnown RBP13.32□□□□□ -0.28
RNF40-208ENST00000565995 MAST4O15021 2626 aa13.32□□□□□ -0.28
RNF40-208ENST00000565995 SLC12A8A0AV02 714 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 ENC1O14682 589 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 TLX3O43711 291 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 CLSTN1O94985 981 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 ZIC2O95409 532 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 DNTTP04053 509 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 NR3C1P04150 777 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 PRB1P04280 392 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 DLDP09622 509 aaKnown RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 HNF1BP35680 557 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 SHBQ15464 509 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 TTC31Q49AM3 519 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 FNDC3BQ53EP0 1204 aaKnown RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 MPP7Q5T2T1 576 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 C6orf118Q5T5N4 469 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 ARHGAP17Q68EM7 881 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 KIAA0895LQ68EN5 471 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 FBXL19Q6PCT2 694 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 CHST9Q7L1S5 443 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 PIGZQ86VD9 579 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 CACUL1Q86Y37 369 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 AHI1Q8N157 1196 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 SNIP1Q8TAD8 396 aaKnown RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 PIP4K2CQ8TBX8 421 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 CYB5D2Q8WUJ1 264 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 TMA16Q96EY4 203 aaKnown RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 MYO19Q96H55 970 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 LMLNQ96KR4 655 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 ZNF396Q96N95 335 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 ELF4Q99607 663 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 ACE2Q9BYF1 805 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 IMPG2Q9BZV3 1241 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 NIF3L1Q9GZT8 377 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 ADAMTS1Q9UHI8 967 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 TRAF3IP3Q9Y228 551 aa13.31□□□□□ -0.28
RNF40-208ENST00000565995 COL27A1Q8IZC6 1860 aaPredicted RBP13.31□□□□□ -0.28
RNF40-208ENST00000565995 YKT6O15498 198 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 RFPL3O75679 317 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 FSBPO95073 299 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 LDOC1O95751 146 aaPredicted RBP13.3□□□□□ -0.28
RNF40-208ENST00000565995 ZBED1O96006 694 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 ATP5BP06576 529 aaKnown RBP13.3□□□□□ -0.28
RNF40-208ENST00000565995 JUPP14923 745 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 HARS2P49590 506 aaKnown RBP13.3□□□□□ -0.28
RNF40-208ENST00000565995 VAMP7P51809 220 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 GALCP54803 685 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 NUCB2P80303 420 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 PPP3CAQ08209 521 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms