RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 WSB2Q9NYS7 404 aaPredicted RBP6.67□□□□□ -1.34
TCF4-228ENST00000565393 SUSD2Q9UGT4 822 aa6.67□□□□□ -1.34
TCF4-228ENST00000565393 GGA2Q9UJY4 613 aa6.67□□□□□ -1.34
TCF4-228ENST00000565393 STOML2Q9UJZ1 356 aa6.67□□□□□ -1.34
TCF4-228ENST00000565393 NCKAP1Q9Y2A7 1128 aa6.67□□□□□ -1.34
TCF4-228ENST00000565393 CEP83Q9Y592 693 aa6.67□□□□□ -1.34
TCF4-228ENST00000565393 PCDHB9Q9Y5E1 797 aa6.67□□□□□ -1.34
TCF4-228ENST00000565393 PTPRZ1P23471 2315 aaPredicted RBP6.67□□□□□ -1.34
TCF4-228ENST00000565393 SYNJ2BP-COX16A0A087WUM0 186 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 A0A1B0GTW7 788 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SPAARA0A1B0GVQ0 90 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 KCNJ18B7U540 433 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SART1O43290 800 aaKnown RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 RNASEH1O60930 286 aaKnown RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 KRT37O76014 449 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 MOCS3O95396 460 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 APOEP02649 317 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 DNTTP04053 509 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SPINK2P20155 84 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 ABCB4P21439 1286 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 GNA15P30679 374 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SLC6A4P31645 630 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 CD70P32970 193 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 KRT9P35527 623 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 MTIF2P46199 727 aaKnown RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 SGSHP51688 502 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 COPAP53621 1224 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 MARSP56192 900 aaKnown RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 PTK2Q05397 1052 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 RING1Q06587 406 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SEMA3BQ13214 749 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 ENPP2Q13822 863 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 DCAF6Q58WW2 860 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 ZC3H12AQ5D1E8 599 aaKnown RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 MPP7Q5T2T1 576 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 DCAF12L1Q5VU92 463 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 MSANTD2Q6P1R3 559 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 FOXR2Q6PJQ5 311 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 GBP6Q6ZN66 633 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 ENOSF1Q7L5Y1 443 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 ADIPOR2Q86V24 386 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 LGI2Q8N0V4 545 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 MINDY1Q8N5J2 469 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 ZNF557Q8N988 423 aaPredicted RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 MLKLQ8NB16 471 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 CADM4Q8NFZ8 388 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 OR2T3Q8NH03 318 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 FIBINQ8TAL6 211 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SNX19Q92543 992 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 AZIN2Q96A70 460 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 FAM81BQ96LP2 452 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SERPINB11Q96P15 392 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 TRIM62Q9BVG3 475 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 SLC4A5Q9BY07 1137 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 LHX5Q9H2C1 402 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 PDCL3Q9H2J4 239 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 THAP9Q9H5L6 903 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 ACP6Q9NPH0 428 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 CHMP5Q9NZZ3 219 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 COX16Q9P0S2 106 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 USP36Q9P275 1121 aaKnown RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 EIF2B4Q9UI10 523 aaKnown RBP6.66□□□□□ -1.34
TCF4-228ENST00000565393 TLR6Q9Y2C9 796 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 WDFY4Q6ZS81 3184 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 CACNA1HO95180 2353 aa6.66□□□□□ -1.34
TCF4-228ENST00000565393 TRIOO75962 3097 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 FAM47DPA6NHR8 397 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 E5RJQ4 531 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 PES1O00541 588 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 BCAT2O15382 392 aaPredicted RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 SH3BP5O60239 455 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 FSBPO95073 299 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 TOP3BO95985 862 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 IGLV3-27P01718 113 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 FYNP06241 537 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 PON1P27169 355 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 ACSL1P33121 698 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 NNMTP40261 264 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 SNX16P57768 344 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 RPS14P62263 151 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 RPS24P62847 133 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 SHC2P98077 582 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 CDK17Q00537 523 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 APBA1Q02410 837 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 SFSWAPQ12872 951 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 NME3Q13232 169 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 SLC14A1Q13336 389 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 CAMK2GQ13555 558 aaPredicted RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 CDH18Q13634 790 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 TAF5Q15542 800 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 TRIP6Q15654 476 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 EXOC3L4Q17RC7 722 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 MS4A13Q5J8X5 152 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 EFHC1Q5JVL4 640 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 RNF219Q5W0B1 726 aaPredicted RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 RAP1GAP2Q684P5 730 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 NADSYN1Q6IA69 706 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 OR6B2Q6IFH4 312 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 TRIM65Q6PJ69 517 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms