RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TFB1MQ8WVM0 346 aaKnown RBP20.21■□□□□ 0.83
CLN6-205ENST00000564846 MCOLN1Q9GZU1 580 aa20.21■□□□□ 0.83
CLN6-205ENST00000564846 NUDT5Q9UKK9 219 aa20.21■□□□□ 0.83
CLN6-205ENST00000564846 MFHAS1Q9Y4C4 1052 aa20.21■□□□□ 0.83
CLN6-205ENST00000564846 PCDHB12Q9Y5F1 795 aa20.21■□□□□ 0.83
CLN6-205ENST00000564846 MYO16Q9Y6X6 1858 aa20.2■□□□□ 0.82
CLN6-205ENST00000564846 MSI1O43347 362 aaKnown RBP20.2■□□□□ 0.82
CLN6-205ENST00000564846 RIPK2O43353 540 aa20.2■□□□□ 0.82
CLN6-205ENST00000564846 RNF40O75150 1001 aa20.2■□□□□ 0.82
CLN6-205ENST00000564846 LRIG2O94898 1065 aa20.2■□□□□ 0.82
CLN6-205ENST00000564846 HTRA4P83105 476 aaPredicted RBP20.2■□□□□ 0.82
CLN6-205ENST00000564846 HEATR6Q6AI08 1181 aaKnown RBP20.2■□□□□ 0.82
CLN6-205ENST00000564846 GIPC2Q8TF65 315 aa20.2■□□□□ 0.82
CLN6-205ENST00000564846 PRCCQ92733 491 aaPredicted RBP20.2■□□□□ 0.82
CLN6-205ENST00000564846 FERMT1Q9BQL6 677 aa20.2■□□□□ 0.82
CLN6-205ENST00000564846 CDC42EP4Q9H3Q1 356 aaKnown RBP20.2■□□□□ 0.82
CLN6-205ENST00000564846 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.2■□□□□ 0.82
CLN6-205ENST00000564846 GOLGA6L10A6NI86 522 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 KCNU1A8MYU2 1149 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 PPP1R12AO14974 1030 aaPredicted RBP20.19■□□□□ 0.82
CLN6-205ENST00000564846 PAGE1O75459 146 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 ZDHHC11BP0C7U3 371 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 EPHB2P29323 1055 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 ZNF844Q08AG5 666 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 SLC29A2Q14542 456 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 CEP85LQ5SZL2 805 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 NAT8LQ8N9F0 302 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 CPT1BQ92523 772 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 BADQ92934 168 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 RBM15Q96T37 977 aaKnown RBP eCLIP20.19■□□□□ 0.82
CLN6-205ENST00000564846 PHACTR1Q9C0D0 580 aa20.19■□□□□ 0.82
CLN6-205ENST00000564846 NCAM2O15394 837 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 GCATO75600 419 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 SERPINB6P35237 376 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 IFFO1Q0D2I5 559 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 RAB33AQ14088 237 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 VPS52Q8N1B4 723 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 FIBCD1Q8N539 461 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 SLC39A13Q96H72 371 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 UBE2OQ9C0C9 1292 aaKnown RBP20.18■□□□□ 0.82
CLN6-205ENST00000564846 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLN6-205ENST00000564846 C5orf60A6NFR6 353 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 POLR3GO15318 223 aaPredicted RBP20.18■□□□□ 0.82
CLN6-205ENST00000564846 TTC4O95801 387 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 NRLP54845 237 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 TBX4P57082 545 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 BASP1P80723 227 aaKnown RBP20.18■□□□□ 0.82
CLN6-205ENST00000564846 NRG1Q02297 640 aaPredicted RBP20.18■□□□□ 0.82
CLN6-205ENST00000564846 RASIP1Q5U651 963 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 PSRC1Q6PGN9 363 aaPredicted RBP20.18■□□□□ 0.82
CLN6-205ENST00000564846 PDZD8Q8NEN9 1154 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 OR2W6PQ8NHA6 318 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 HTR3CQ8WXA8 447 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 OVCA2Q8WZ82 227 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 C1orf74Q96LT6 269 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 CDK5RAP1Q96SZ6 601 aaKnown RBP20.18■□□□□ 0.82
CLN6-205ENST00000564846 BRD8Q9H0E9 1235 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 MRPL17Q9NRX2 175 aaKnown RBP20.18■□□□□ 0.82
CLN6-205ENST00000564846 MAFFQ9ULX9 164 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 SNX10Q9Y5X0 201 aa20.18■□□□□ 0.82
CLN6-205ENST00000564846 SEC24AO95486 1093 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 MYZAPP0CAP1 466 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 HOXC13P31276 330 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 CREMQ03060 361 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 EFEMP1Q12805 493 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 PRKD1Q15139 912 aaPredicted RBP20.17■□□□□ 0.82
CLN6-205ENST00000564846 TRIP4Q15650 581 aaPredicted RBP20.17■□□□□ 0.82
CLN6-205ENST00000564846 CENPUQ71F23 418 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 ZNF276Q8N554 614 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 FCRL2Q96LA5 508 aaPredicted RBP20.17■□□□□ 0.82
CLN6-205ENST00000564846 PWWP2AQ96N64 755 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 KLC2Q9H0B6 622 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 SIK2Q9H0K1 926 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 CYP4F11Q9HBI6 524 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 VPS18Q9P253 973 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 PCDH10Q9P2E7 1040 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 MAGED2Q9UNF1 606 aaPredicted RBP20.17■□□□□ 0.82
CLN6-205ENST00000564846 INSL6Q9Y581 213 aa20.17■□□□□ 0.82
CLN6-205ENST00000564846 CHADO15335 359 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 FGF10O15520 208 aaPredicted RBP20.16■□□□□ 0.82
CLN6-205ENST00000564846 STK10O94804 968 aaKnown RBP20.16■□□□□ 0.82
CLN6-205ENST00000564846 APOEP02649 317 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 CSH1P0DML2 217 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 CSH2P0DML3 217 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 MX2P20592 715 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 ALDH1A3P47895 512 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 HIF1AQ16665 826 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 C10orf120Q5SQS8 335 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 CROCCP2Q86T23 111 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 LGMNQ99538 433 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 ZBED2Q9BTP6 218 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 PRDM12Q9H4Q4 367 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 RAB6BQ9NRW1 208 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 DNAJC17Q9NVM6 304 aaKnown RBP20.16■□□□□ 0.82
CLN6-205ENST00000564846 MARCH2Q9P0N8 246 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 FNIP2Q9P278 1114 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 SLC12A6Q9UHW9 1150 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 SSX2IPQ9Y2D8 614 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 FGF18O76093 207 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 SRGAP2BP0DMP2 458 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms