RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CPA5Q8WXQ8 436 aa14.19□□□□□ -0.14
CNOT1-206ENST00000564557 DDX1Q92499 740 aaKnown RBP14.19□□□□□ -0.14
CNOT1-206ENST00000564557 FCRL2Q96LA5 508 aaPredicted RBP14.19□□□□□ -0.14
CNOT1-206ENST00000564557 CIPCQ9C0C6 399 aa14.19□□□□□ -0.14
CNOT1-206ENST00000564557 HSD3B7Q9H2F3 369 aa14.19□□□□□ -0.14
CNOT1-206ENST00000564557 ZDHHC4Q9NPG8 344 aa14.19□□□□□ -0.14
CNOT1-206ENST00000564557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.19□□□□□ -0.141e-7■□□□□ 9.3
CNOT1-206ENST00000564557 STIM2Q9P246 746 aa14.19□□□□□ -0.14
CNOT1-206ENST00000564557 FBXO10Q9UK96 956 aa14.19□□□□□ -0.14
CNOT1-206ENST00000564557 SLC27A6Q9Y2P4 619 aa14.19□□□□□ -0.14
CNOT1-206ENST00000564557 GOLGA6L7A0A1B0GV03 622 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 FAM170AA1A519 330 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 PRRT4C9JH25 899 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 GOLGA8SH3BPF8 625 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 NPC1O15118 1278 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 TEX33O43247 280 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 HRO43593 1189 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 TIMM44O43615 452 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 DAB1O75553 588 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 HOXB2P14652 356 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 FERP16591 822 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 WASP42768 502 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 GABRB2P47870 512 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 EGFLAMQ63HQ2 1017 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 OLFML1Q6UWY5 402 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 TMEM92Q6UXU6 159 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 CHSY1Q86X52 802 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 SUMF1Q8NBK3 374 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 ZNF397Q8NF99 534 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-206ENST00000564557 SLC20A1Q8WUM9 679 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 GAB3Q8WWW8 586 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 SLC39A13Q96H72 371 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 PIWIL1Q96J94 861 aaKnown RBP14.18□□□□□ -0.14
CNOT1-206ENST00000564557 BTN2A3PQ96KV6 586 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 SLC2A13Q96QE2 648 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 FUCA2Q9BTY2 467 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 CBX8Q9HC52 389 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 TMEM51Q9NW97 253 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 EBF1Q9UH73 591 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 PAXBP1Q9Y5B6 917 aa14.18□□□□□ -0.14
CNOT1-206ENST00000564557 TCRBV21S2A2A0A5A6 115 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 ANTXRLA6NF34 631 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 F5H5T6 163 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 M0QYT0 321 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 HOXD9P28356 352 aaPredicted RBP14.17□□□□□ -0.14
CNOT1-206ENST00000564557 SCNN1AP37088 669 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 MATKP42679 507 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 NSFP46459 744 aaKnown RBP14.17□□□□□ -0.14
CNOT1-206ENST00000564557 SULT1E1P49888 294 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 NOMO3P69849 1222 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 SRSF5Q13243 272 aaKnown RBP14.17□□□□□ -0.14
CNOT1-206ENST00000564557 BYSLQ13895 437 aaKnown RBP14.17□□□□□ -0.14
CNOT1-206ENST00000564557 STARD3Q14849 445 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 IQCB1Q15051 598 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 EIF4HQ15056 248 aaKnown RBP14.17□□□□□ -0.14
CNOT1-206ENST00000564557 ZSCAN23Q3MJ62 389 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 MPP7Q5T2T1 576 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 PIK3R6Q5UE93 754 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 LAIR1Q6GTX8 287 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 APTXQ7Z2E3 356 aaKnown RBP14.17□□□□□ -0.14
CNOT1-206ENST00000564557 LUZP1Q86V48 1076 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 C11orf74Q86VG3 221 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 MFN1Q8IWA4 741 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 LGI2Q8N0V4 545 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 WFIKKN2Q8TEU8 576 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 HMGB4Q8WW32 186 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 SPACA7Q96KW9 195 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 TPSD1Q9BZJ3 242 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 ELOVL2Q9NXB9 296 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 NOCTQ9UK39 431 aaKnown RBP14.17□□□□□ -0.14
CNOT1-206ENST00000564557 PLA2G4CQ9UP65 541 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 KIAA1549LQ6ZVL6 1849 aa14.17□□□□□ -0.14
CNOT1-206ENST00000564557 MYO18AQ92614 2054 aaKnown RBP14.16□□□□□ -0.14
CNOT1-206ENST00000564557 A0A1W2PQC6 194 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 KCNU1A8MYU2 1149 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 H0Y626 953 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 GFRA2O00451 464 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 SYNCRIPO60506 623 aaKnown RBP14.16□□□□□ -0.14
CNOT1-206ENST00000564557 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 MOCS3O95396 460 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 F9P00740 461 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 ATP5BP06576 529 aaKnown RBP14.16□□□□□ -0.14
CNOT1-206ENST00000564557 HNRNPLP14866 589 aaKnown RBP eCLIP14.16□□□□□ -0.149e-8■□□□□ 9.2
CNOT1-206ENST00000564557 HOXC13P31276 330 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 SLC6A4P31645 630 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 FMO1Q01740 532 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 CDH18Q13634 790 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 ELF2Q15723 593 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 GEN1Q17RS7 908 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 FAM133BQ5BKY9 247 aaKnown RBP14.16□□□□□ -0.14
CNOT1-206ENST00000564557 MS4A13Q5J8X5 152 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 RAP1GAP2Q684P5 730 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 XYLT1Q86Y38 959 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 AHI1Q8N157 1196 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 CARNMT1Q8N4J0 409 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 GPR161Q8N6U8 529 aaKnown RBP14.16□□□□□ -0.14
CNOT1-206ENST00000564557 NUCKS1Q9H1E3 243 aaKnown RBP14.16□□□□□ -0.14
CNOT1-206ENST00000564557 WDCPQ9H6R7 721 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 ABCB8Q9NUT2 735 aa14.16□□□□□ -0.14
CNOT1-206ENST00000564557 CACNA2D2Q9NY47 1150 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms