RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	FRG1	Q14331	258 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PDK2	Q15119	407 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SCYL2	Q6P3W7	929 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	BTN2A1	Q7KYR7	527 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TADA1	Q96BN2	335 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TRMO	Q9BU70	441 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MTMR12	Q9C0I1	747 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GON4L	Q3T8J9	2241 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	hCG_1642624	A0A1W2PR95	340 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CAPN8	A6NHC0	703 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CRTAM	O95727	393 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	KCNJ8	Q15842	424 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SNAP47	Q5SQN1	464 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM45BP	Q6NSW5	357 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	LINC00523	Q86TU6	105 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SUPT20H	Q8NEM7	779 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIM8	Q9BZR9	551 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	POMP	Q9Y244	141 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	IFRD1	O00458	451 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	IL6ST	P40189	918 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TIFAB	Q6ZNK6	161 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	C7orf43	Q8WVR3	580 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ATP6V1E2	Q96A05	226 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM167A	Q96KS9	214 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SLA2	Q9H6Q3	261 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	C3orf18	Q9UK00	162 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ATRX	P46100	2492 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SNX4	O95219	450 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	S100A6	P06703	90 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ITGAV	P06756	1048 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CTRC	Q99895	268 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SP140L	Q9H930	580 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MTF2	Q9Y483	593 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	LSM8	O95777	96 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PRKACA	P17612	351 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	S100A12	P80511	92 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PUS10	Q3MIT2	529 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ANKMY2	Q8IV38	441 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PSMA8	Q8TAA3	256 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIM38	O00635	465 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PSMA2	P25787	234 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NPY2R	P49146	381 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ANKRD53	Q8N9V6	530 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NKD2	Q969F2	451 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SRPK1	Q96SB4	655 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GTPBP2	Q9BX10	602 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF717	Q9BY31	904 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NPAP1	Q9NZP6	1156 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GPN3	Q9UHW5	284 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	KIF20B	Q96Q89	1820 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PTK7	Q13308	1070 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PDK1	Q15118	436 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CAND1	Q86VP6	1230 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PELO	Q9BRX2	385 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	KANSL2	Q9H9L4	492 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ANKRD6	Q9Y2G4	727 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GRIP1	Q9Y3R0	1128 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MEI4	A8MW99	385 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	UBD	O15205	165 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PRDM1	O75626	825 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	APRT	P07741	180 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GRIA2	P42262	883 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ABL2	P42684	1182 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	JAK3	P52333	1124 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MARS	P56192	900 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	DGKK	Q5KSL6	1271 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	SLX4IP	Q5VYV7	408 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ACOT9	Q9Y305	439 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TNFRSF10A	O00220	468 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FOXN2	P32314	431 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	QPRT	Q15274	297 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MYLK3	Q32MK0	819 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NADK2	Q4G0N4	442 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	WDR41	Q9HAD4	459 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	KIF17	Q9P2E2	1029 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	COL3A1	P02461	1466 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	RCCD1	A6NED2	376 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TFEC	O14948	347 aa	Predicted RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	ACOX3	O15254	700 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	IL2RB	P14784	551 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	OR2B6	P58173	313 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	FAAP100	Q0VG06	881 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	OVGP1	Q12889	678 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	DPYSL3	Q14195	570 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MCFD2	Q8NI22	146 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	RDH11	Q8TC12	318 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	GMIP	Q9P107	970 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PMM2	O15305	246 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	DYRK3	O43781	588 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	RALA	P11233	206 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	COL6A2	P12110	1019 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	TMEM214	Q6NUQ4	689 aa	Known RBP	4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	P3H2	Q8IVL5	708 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	CDCA5	Q96FF9	252 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	PHF12	Q96QT6	1004 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms