RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 RRAGAQ7L523 313 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 BHLHA9Q7RTU4 235 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 CHCHD4Q8N4Q1 142 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 ZNF366Q8N895 744 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 ENGASEQ8NFI3 743 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 GANCQ8TET4 914 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 SETD7Q8WTS6 366 aaKnown RBP17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 TFAP2BQ92481 460 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 CAMK1GQ96NX5 476 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 LHX5Q9H2C1 402 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 ST7Q9NRC1 585 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 SUN2Q9UH99 717 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 EIF2B4Q9UI10 523 aaKnown RBP17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 GGA2Q9UJY4 613 aa17.1■□□□□ 0.33
AC004449.1-201ENST00000564240 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 TYW5A2RUC4 315 aaKnown RBP17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 LATS1O95835 1130 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 LTFP02788 710 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 PABPC1P11940 636 aaKnown RBP17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 HLA-FP30511 346 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 COPAP53621 1224 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 FAM193AP78312 1265 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 GRIK2Q13002 908 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 NUGGCQ68CJ6 796 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 MBLAC2Q68D91 279 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 CREBRFQ8IUR6 639 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 AHI1Q8N157 1196 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 RBBP8NLQ8NC74 664 aaPredicted RBP17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 SLC35F5Q8WV83 523 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 DNASE2BQ8WZ79 361 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 IRGQQ8WZA9 623 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 DDX50Q9BQ39 737 aaKnown RBP17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 GAREM1Q9H706 876 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 NEUROG3Q9Y4Z2 214 aa17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 KMT2BQ9UMN6 2715 aaPredicted RBP17.09■□□□□ 0.33
AC004449.1-201ENST00000564240 BICDL2A1A5D9 508 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 TMEM8BA6NDV4 472 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 ACSL4O60488 711 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 FBXO21O94952 628 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 CALCAP01258 141 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 DNTTP04053 509 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 MATKP42679 507 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 ST8SIA6P61647 398 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 NAXDQ8IW45 347 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 SCML4Q8N228 414 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 NELFBQ8WX92 580 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 KAT5Q92993 513 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 FAM149B1Q96BN6 582 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 MAN1B1Q9UKM7 699 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 KLK13Q9UKR3 277 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 WASF3Q9UPY6 502 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 MSRB2Q9Y3D2 182 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 NFE2L3Q9Y4A8 694 aa17.08■□□□□ 0.32
AC004449.1-201ENST00000564240 CEP295Q9C0D2 2601 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 BIN1O00499 593 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 CAPN9O14815 690 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 CER1O95813 267 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 KRT5P13647 590 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 STX17P56962 302 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 CAMK2GQ13555 558 aaPredicted RBP17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 PKDCCQ504Y2 493 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 PIK3R6Q5UE93 754 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 IL27RAQ6UWB1 636 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 MFN1Q8IWA4 741 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 CARNMT1Q8N4J0 409 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 UBR7Q8N806 425 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 ZNF557Q8N988 423 aaPredicted RBP17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 KDF1Q8NAX2 398 aaPredicted RBP17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 SPATA20Q8TB22 786 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 CLEC4CQ8WTT0 213 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 ZCCHC14Q8WYQ9 949 aaKnown RBP17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 HSFY1Q96LI6 401 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 BTBD1Q9H0C5 482 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 STOML2Q9UJZ1 356 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 CTNND2Q9UQB3 1225 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 NCKAP1Q9Y2A7 1128 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 CEP83Q9Y592 693 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
AC004449.1-201ENST00000564240 A0A1B0GVT2 93 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 P4HA2O15460 535 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 IRAK2O43187 625 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 FSBPO95073 299 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 MOCS2O96007 188 aaPredicted RBP17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 CD44P16070 742 aaKnown RBP17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 CSNK1EP49674 416 aaKnown RBP17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 SGSHP51688 502 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 KCNH2Q12809 1159 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 TEAD4Q15561 434 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 TTC31Q49AM3 519 aaPredicted RBP17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 MSANTD2Q6P1R3 559 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 ADIPOR2Q86V24 386 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 SCUBE3Q8IX30 993 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms