RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 PCDHGB2Q9Y5G2 931 aa21.79■■□□□ 1.08
HERC2-204ENST00000563945 ANKRD11Q6UB99 2663 aaPredicted RBP21.78■■□□□ 1.08
HERC2-204ENST00000563945 FAM237AA0A1B0GTK4 181 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 GOLGA8CPA6NN73 597 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 TAF4O00268 1085 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 ZZEF1O43149 2961 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 CBFA2T3O75081 653 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 ZNF202O95125 648 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 VDRP11473 427 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 PABPC1P11940 636 aaKnown RBP21.78■■□□□ 1.08
HERC2-204ENST00000563945 POLR2EP19388 210 aaKnown RBP21.78■■□□□ 1.08
HERC2-204ENST00000563945 HLA-FP30511 346 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 ZBTB16Q05516 673 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 CUL2Q13617 745 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 ZCWPW2Q504Y3 356 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 ADAT2Q7Z6V5 191 aaKnown RBP21.78■■□□□ 1.08
HERC2-204ENST00000563945 SLCO6A1Q86UG4 719 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 ZNF557Q8N988 423 aaPredicted RBP21.78■■□□□ 1.08
HERC2-204ENST00000563945 RBBP8NLQ8NC74 664 aaPredicted RBP21.78■■□□□ 1.08
HERC2-204ENST00000563945 UBA3Q8TBC4 463 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 GANCQ8TET4 914 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 GOLGA1Q92805 767 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 RMND1Q9NWS8 449 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 KIAA1257Q9ULG3 409 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 NCKAP1Q9Y2A7 1128 aa21.78■■□□□ 1.08
HERC2-204ENST00000563945 A0A1W2PQ27 194 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 A0A1W2PQ64 194 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 TULP2O00295 520 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 SEMA4FO95754 770 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 SETSIPP0DME0 302 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 LCP1P13796 627 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 ACSL1P33121 698 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 SLC11A2P49281 568 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 SFSWAPQ12872 951 aaKnown RBP21.77■■□□□ 1.08
HERC2-204ENST00000563945 MBLAC2Q68D91 279 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 CCDC117Q8IWD4 279 aaPredicted RBP21.77■■□□□ 1.08
HERC2-204ENST00000563945 UNC45BQ8IWX7 931 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 ZNF366Q8N895 744 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 TMEM245Q9H330 911 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 C6orf106Q9H6K1 298 aaPredicted RBP21.77■■□□□ 1.08
HERC2-204ENST00000563945 CNGB3Q9NQW8 809 aa21.77■■□□□ 1.08
HERC2-204ENST00000563945 YJEFN3A6XGL0 299 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 E7ENQ6 273 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 TBL1XO60907 577 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 FSBPO95073 299 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 DLDP09622 509 aaKnown RBP21.76■■□□□ 1.07
HERC2-204ENST00000563945 HOXB3P14651 431 aaPredicted RBP21.76■■□□□ 1.07
HERC2-204ENST00000563945 TBXAS1P24557 533 aaPredicted RBP21.76■■□□□ 1.07
HERC2-204ENST00000563945 MCCD1P59942 119 aaPredicted RBP21.76■■□□□ 1.07
HERC2-204ENST00000563945 ST8SIA6P61647 398 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 KIF19Q2TAC6 998 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 C19orf48Q6RUI8 117 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 SMYD4Q8IYR2 804 aaPredicted RBP21.76■■□□□ 1.07
HERC2-204ENST00000563945 KNL1Q8NG31 2342 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 KCTD13Q8WZ19 329 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 SGK2Q9HBY8 427 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 STOML2Q9UJZ1 356 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 ANKRD6Q9Y2G4 727 aa21.76■■□□□ 1.07
HERC2-204ENST00000563945 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.76■■□□□ 1.07
HERC2-204ENST00000563945 TYW5A2RUC4 315 aaKnown RBP21.75■■□□□ 1.07
HERC2-204ENST00000563945 SLC16A3O15427 465 aaKnown RBP21.75■■□□□ 1.07
HERC2-204ENST00000563945 RNASEH1O60930 286 aaKnown RBP21.75■■□□□ 1.07
HERC2-204ENST00000563945 FKBP3Q00688 224 aaKnown RBP21.75■■□□□ 1.07
HERC2-204ENST00000563945 BNC1Q01954 994 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 LRMPQ12912 555 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 CBWD6Q4V339 395 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 CBWD3Q5JTY5 395 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 CBWD5Q5RIA9 395 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 ZNF776Q68DI1 518 aaPredicted RBP21.75■■□□□ 1.07
HERC2-204ENST00000563945 ADIPOR2Q86V24 386 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 C1orf216Q8TAB5 229 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 DDX50Q9BQ39 737 aaKnown RBP21.75■■□□□ 1.07
HERC2-204ENST00000563945 IRX2Q9BZI1 471 aaPredicted RBP21.75■■□□□ 1.07
HERC2-204ENST00000563945 TM9SF3Q9HD45 589 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 OSGEPQ9NPF4 335 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 PRSS16Q9NQE7 514 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.75■■□□□ 1.07
HERC2-204ENST00000563945 SNX11Q9Y5W9 270 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 CKAP5Q14008 2032 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 BAHCC1Q9P281 2608 aa21.75■■□□□ 1.07
HERC2-204ENST00000563945 IRAK2O43187 625 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 MSI1O43347 362 aaKnown RBP21.74■■□□□ 1.07
HERC2-204ENST00000563945 ATXN1LP0C7T5 689 aaKnown RBP21.74■■□□□ 1.07
HERC2-204ENST00000563945 CD27P26842 260 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 GRIA4P48058 902 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 RPS14P62263 151 aaKnown RBP21.74■■□□□ 1.07
HERC2-204ENST00000563945 ACAP1Q15027 740 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 MPP7Q5T2T1 576 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 NUGGCQ68CJ6 796 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 BHLHA9Q7RTU4 235 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 GALNT15Q8N3T1 639 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.74■■□□□ 1.07
HERC2-204ENST00000563945 BIRC7Q96CA5 298 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 STIM2Q9P246 746 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 ARMCX3Q9UH62 379 aaPredicted RBP21.74■■□□□ 1.07
HERC2-204ENST00000563945 COQ4Q9Y3A0 265 aa21.74■■□□□ 1.07
HERC2-204ENST00000563945 DSPP15924 2871 aaKnown RBP21.73■■□□□ 1.07
HERC2-204ENST00000563945 CAPNS1P04632 268 aa21.73■■□□□ 1.07
HERC2-204ENST00000563945 GRK6P43250 576 aa21.73■■□□□ 1.07
HERC2-204ENST00000563945 RGS7P49802 495 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms