RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 STOML2Q9UJZ1 356 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 PILRBQ9UKJ0 227 aa18.38■□□□□ 0.53
NME3-205ENST00000563854 TYW5A2RUC4 315 aaKnown RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 BECN2A8MW95 431 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 PES1O00541 588 aaKnown RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 PAPSS1O43252 624 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 FYNP06241 537 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 ACADMP11310 421 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 PABPC1P11940 636 aaKnown RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 PRKCSHP14314 528 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 ENGP17813 658 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 ANP32AP39687 249 aaKnown RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 DPP6P42658 865 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 NOVA1P51513 510 aaKnown RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 ATXN3P54252 364 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 RING1Q06587 406 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 PDCLQ13371 301 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 FAM133BQ5BKY9 247 aaKnown RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 N4BP2L1Q5TBK1 243 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 NADSYN1Q6IA69 706 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 TMPRSS6Q8IU80 811 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 MFN1Q8IWA4 741 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 AHI1Q8N157 1196 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 PRCCQ92733 491 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 SIPA1Q96FS4 1042 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 FCRL2Q96LA5 508 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 FAM81BQ96LP2 452 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 PRICKLE1Q96MT3 831 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 TJP2Q9UDY2 1190 aa18.37■□□□□ 0.53
NME3-205ENST00000563854 AJAP1Q9UKB5 411 aaPredicted RBP18.37■□□□□ 0.53
NME3-205ENST00000563854 MEI4A8MW99 385 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 CDX4O14627 284 aaPredicted RBP18.36■□□□□ 0.53
NME3-205ENST00000563854 TIMM44O43615 452 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 KCNK5O95279 499 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
NME3-205ENST00000563854 PON1P27169 355 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 CD6P30203 668 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 CD70P32970 193 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 ENPP2Q13822 863 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 MAN2A1Q16706 1144 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 DUOXA1Q1HG43 343 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 PIK3R6Q5UE93 754 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 SYPL2Q5VXT5 272 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 MBLAC2Q68D91 279 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 FAM114A1Q8IWE2 563 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 CARNMT1Q8N4J0 409 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 HJURPQ8NCD3 748 aaPredicted RBP18.36■□□□□ 0.53
NME3-205ENST00000563854 CEP192Q8TEP8 1941 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 TOE1Q96GM8 510 aaKnown RBP18.36■□□□□ 0.53
NME3-205ENST00000563854 CNTNAP3BQ96NU0 1288 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 DDX50Q9BQ39 737 aaKnown RBP18.36■□□□□ 0.53
NME3-205ENST00000563854 TRIM62Q9BVG3 475 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 SLC4A5Q9BY07 1137 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 CNTNAP3Q9BZ76 1288 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
NME3-205ENST00000563854 THAP9Q9H5L6 903 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 DACH1Q9UI36 760 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 PLA2G4CQ9UP65 541 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 TLR6Q9Y2C9 796 aa18.36■□□□□ 0.53
NME3-205ENST00000563854 SYNJ2BP-COX16A0A087WUM0 186 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 GIPC1O14908 333 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 IRAK2O43187 625 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 APOEP02649 317 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 RPL34P49207 117 aaKnown RBP18.35■□□□□ 0.53
NME3-205ENST00000563854 COPAP53621 1224 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 RPS24P62847 133 aaKnown RBP18.35■□□□□ 0.53
NME3-205ENST00000563854 MEA1Q16626 185 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 SLC23A3Q6PIS1 610 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 FAM124AQ86V42 546 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
NME3-205ENST00000563854 CFAP52Q8N1V2 620 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 CEP76Q8TAP6 659 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 STK32AQ8WU08 396 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 SHC3Q92529 594 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 MYEOVQ96EZ4 313 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 GPR174Q9BXC1 333 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 POPDC2Q9HBU9 364 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 COX16Q9P0S2 106 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 USP36Q9P275 1121 aaKnown RBP18.35■□□□□ 0.53
NME3-205ENST00000563854 XPO7Q9UIA9 1087 aaKnown RBP18.35■□□□□ 0.53
NME3-205ENST00000563854 DNAJC12Q9UKB3 198 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 SLC6A14Q9UN76 642 aa18.35■□□□□ 0.53
NME3-205ENST00000563854 GTPBP10A4D1E9 387 aaKnown RBP18.34■□□□□ 0.53
NME3-205ENST00000563854 KCNJ18B7U540 433 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 POLR2EP19388 210 aaKnown RBP18.34■□□□□ 0.53
NME3-205ENST00000563854 MAOBP27338 520 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 HOXD12P35452 270 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 TPMTP51580 245 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 YWHAZP63104 245 aaKnown RBP18.34■□□□□ 0.53
NME3-205ENST00000563854 PTK2Q05397 1052 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 GFPT1Q06210 699 aaPredicted RBP18.34■□□□□ 0.53
NME3-205ENST00000563854 NNTQ13423 1086 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 CDH18Q13634 790 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 TAF5Q15542 800 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 ZC3H12AQ5D1E8 599 aaKnown RBP18.34■□□□□ 0.53
NME3-205ENST00000563854 SYCP2LQ5T4T6 812 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 SH3PXD2AQ5TCZ1 1133 aa18.34■□□□□ 0.53
NME3-205ENST00000563854 PEAR1Q5VY43 1037 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms