RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DENND1CQ8IV53 801 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 CCDC65Q8IXS2 484 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 DCBLD1Q8N8Z6 715 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 HIC2Q96JB3 615 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 MRGPRX3Q96LB0 322 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 TNMDQ9H2S6 317 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 STOML2Q9UJZ1 356 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 NAGPAQ9UK23 515 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 INTS6Q9UL03 887 aaKnown RBP10.85□□□□□ -0.67
SF3B3-204ENST00000563739 R3HCC1Q9Y3T6 440 aaKnown RBP10.85□□□□□ -0.67
SF3B3-204ENST00000563739 PCDHB1Q9Y5F3 818 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 RELNP78509 3460 aa10.85□□□□□ -0.67
SF3B3-204ENST00000563739 KIF26BQ2KJY2 2108 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 TLN1Q9Y490 2541 aaKnown RBP10.84□□□□□ -0.67
SF3B3-204ENST00000563739 TULP2O00295 520 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 ACADMP11310 421 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 CD70P32970 193 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 RACK1P63244 317 aaKnown RBP10.84□□□□□ -0.67
SF3B3-204ENST00000563739 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 TRPC3Q13507 836 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 TEAD4Q15561 434 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 TRIP4Q15650 581 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-204ENST00000563739 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 TBC1D25Q3MII6 688 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 RAB41Q5JT25 222 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 C6orf118Q5T5N4 469 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-204ENST00000563739 UNC93AQ86WB7 457 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 EID2Q8N6I1 236 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 UCMAQ8WVF2 138 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 NDRG1Q92597 394 aaKnown RBP10.84□□□□□ -0.67
SF3B3-204ENST00000563739 TMEM176AQ96HP8 235 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 SLC2A11Q9BYW1 496 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 BTBD1Q9H0C5 482 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 RSPH9Q9H1X1 276 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-204ENST00000563739 PABPC3Q9H361 631 aaKnown RBP10.84□□□□□ -0.67
SF3B3-204ENST00000563739 CPNE5Q9HCH3 593 aa10.84□□□□□ -0.67
SF3B3-204ENST00000563739 ERVH48-1M5A8F1 160 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 KLRC4O43908 158 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 LDOC1O95751 146 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-204ENST00000563739 GIMD1P0DJR0 217 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 JUPP14923 745 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 METAP1P53582 386 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 GALCP54803 685 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 NXPH1P58417 271 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 PPP2CBP62714 309 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 PPP2CAP67775 309 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 CXADRP78310 365 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 CEBPZQ03701 1054 aaKnown RBP10.83□□□□□ -0.68
SF3B3-204ENST00000563739 GOLGA8FQ08AF8 430 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 GOLGA8DPQ0D2H9 430 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 BIRC3Q13489 604 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 SLC39A14Q15043 492 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 RABEP1Q15276 862 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 FNDC3BQ53EP0 1204 aaKnown RBP10.83□□□□□ -0.68
SF3B3-204ENST00000563739 NCEH1Q6PIU2 408 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 SV2AQ7L0J3 742 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 CHST9Q7L1S5 443 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 CACTIN-AS1Q8N1I8 211 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 FGF11Q92914 225 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 FAM131CQ96AQ9 280 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 CYFIP2Q96F07 1278 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 PRICKLE1Q96MT3 831 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-204ENST00000563739 ARID3AQ99856 593 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 ABCB8Q9NUT2 735 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 SMC3Q9UQE7 1217 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 ZNF510Q9Y2H8 683 aa10.83□□□□□ -0.68
SF3B3-204ENST00000563739 LY6G6EA0A0G2JKS1 128 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 SLC12A8A0AV02 714 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 GABBR2O75899 941 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 HLA-DRAP01903 254 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 C1SP09871 688 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 SLC6A4P31645 630 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 HNF1BP35680 557 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 CHKAP35790 457 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 NASPP49321 788 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-204ENST00000563739 BCAT1P54687 386 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 ASIC1P78348 528 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 ZBTB16Q05516 673 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 PDE4CQ08493 712 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 CUL4AQ13619 759 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 LY6DQ14210 128 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 PKDCCQ504Y2 493 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 FAM133BQ5BKY9 247 aaKnown RBP10.82□□□□□ -0.68
SF3B3-204ENST00000563739 CDCP2Q5VXM1 449 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 MBLAC2Q68D91 279 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 SHC4Q6S5L8 630 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 AADATQ8N5Z0 425 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 KIAA0895Q8NCT3 520 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 TMEM174Q8WUU8 243 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 SNRNP27Q8WVK2 155 aaKnown RBP10.82□□□□□ -0.68
SF3B3-204ENST00000563739 C7orf25Q9BPX7 421 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 DUSP16Q9BY84 665 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 KCTD10Q9H3F6 313 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 SGK2Q9HBY8 427 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 ASCL3Q9NQ33 180 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 MARCH2Q9P0N8 246 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 ADAMTS1Q9UHI8 967 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms