RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 MAPK13O15264 365 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 EXTL3O43909 919 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 TOM1L1O75674 476 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 PIGRP01833 764 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 PTMAP06454 111 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 FAM153BP0C7A2 387 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ZNF18P17022 549 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ZSCAN20P17040 1043 aaPredicted RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 SFPQP23246 707 aaKnown RBP eCLIP4.98□□□□□ -1.61
CDR2-203ENST00000563573 AXLP30530 894 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 HOXD13P35453 343 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 THPOP40225 353 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 CYP2J2P51589 502 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 COPB1P53618 953 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 MRPS6P82932 125 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 UBXN1Q04323 297 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ABHD18Q0P651 414 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 CCDC173Q0VFZ6 552 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 DRP2Q13474 957 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 MAN2A1Q16706 1144 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 KYAT1Q16773 422 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 FAM187BQ17R55 369 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ZCWPW2Q504Y3 356 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 USP39Q53GS9 565 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 FOXB2Q5VYV0 432 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 CDCA2Q69YH5 1023 aaPredicted RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 TSHZ1Q6ZSZ6 1077 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 INTS8Q75QN2 995 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 RPAINQ86UA6 219 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 C12orf56Q8IXR9 622 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 GPD1LQ8N335 351 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 U2AF1L4Q8WU68 220 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 ZBTB10Q96DT7 871 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ZNF503Q96F45 646 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 MRFAP1L1Q96HT8 127 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ZNF333Q96JL9 665 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 EXOC2Q96KP1 924 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 MED15Q96RN5 788 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ACO2Q99798 780 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 DPYSL5Q9BPU6 564 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 MSTO1Q9BUK6 570 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 KIFC3Q9BVG8 833 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 XPO4Q9C0E2 1151 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 OR10A5Q9H207 317 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 IFT122Q9HBG6 1241 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 SMURF1Q9HCE7 757 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 AGPAT3Q9NRZ7 376 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 DMAC2Q9NW81 257 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 AGO2Q9UKV8 859 aaKnown RBP4.98□□□□□ -1.61
CDR2-203ENST00000563573 GINS2Q9Y248 185 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ASB1Q9Y576 335 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.98□□□□□ -1.61
CDR2-203ENST00000563573 TRPV2Q9Y5S1 764 aa4.98□□□□□ -1.61
CDR2-203ENST00000563573 ZMYM2Q9UBW7 1377 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 OGTO15294 1046 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 CAND2O75155 1236 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 GPR32O75388 356 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 RPS6KA5O75582 802 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 AFPP02771 609 aaKnown RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 MCF2P10911 925 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ATP1A3P13637 1013 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 DARSP14868 501 aaKnown RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 HOXC8P31273 242 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 CDK7P50613 346 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ZNF75DP51815 510 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 POU5F1Q01860 360 aaKnown RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 MBTD1Q05BQ5 628 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ENPEPQ07075 957 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 BFSP2Q13515 415 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 PCOLCEQ15113 449 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 KRT31Q15323 416 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 DCAF4L1Q3SXM0 396 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 C2orf27AQ580R0 203 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ATF7IP2Q5U623 682 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 TMEM200BQ69YZ2 307 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 GRAMD4Q6IC98 578 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 NOTUMQ6P988 496 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 SLC39A5Q6ZMH5 540 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 Q6ZSN1 163 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 FAM43BQ6ZT52 329 aaPredicted RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 ADGRE4PQ86SQ3 457 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 SERINC5Q86VE9 423 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ZC3H3Q8IXZ2 948 aaKnown RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 HACE1Q8IYU2 909 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 USP38Q8NB14 1042 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ZNF397Q8NF99 534 aaPredicted RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 CAGE1Q8TC20 777 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 CACTINQ8WUQ7 758 aaKnown RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 LPPQ93052 612 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 TRIM44Q96DX7 344 aaPredicted RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 EEF2KMTQ96G04 330 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ZNF668Q96K58 619 aaPredicted RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 ZBTB45Q96K62 511 aaPredicted RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 NAP1L5Q96NT1 182 aaPredicted RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 OR14A2Q96R54 314 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 FNBP1Q96RU3 617 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 CBWD1Q9BRT8 395 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 FAM213AQ9BRX8 229 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms