RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 ANKRD52Q8NB46 1076 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 MYCBPAPQ8TBZ2 947 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 SPPL2BQ8TCT7 592 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 SH3RF2Q8TEC5 729 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 STK32AQ8WU08 396 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 HMGB4Q8WW32 186 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 ATP2A3Q93084 1043 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 ERLEC1Q96DZ1 483 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 CYFIP2Q96F07 1278 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 CRELD1Q96HD1 420 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 FUBP3Q96I24 572 aaKnown RBP eCLIP9.89□□□□□ -0.83
RPAP1-205ENST00000563293 PKMYT1Q99640 499 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 SYT15Q9BQS2 421 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 NUSAP1Q9BXS6 441 aaKnown RBP9.89□□□□□ -0.83
RPAP1-205ENST00000563293 UBXN6Q9BZV1 441 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 TSGA10Q9BZW7 698 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 KCNF1Q9H3M0 494 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 CAPN10Q9HC96 672 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 CYLDQ9NQC7 956 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 NAGPAQ9UK23 515 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 ZKSCAN5Q9Y2L8 839 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 RAXQ9Y2V3 346 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 PCDHB5Q9Y5E4 795 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.89□□□□□ -0.83
RPAP1-205ENST00000563293 TENM4Q6N022 2769 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 KNL1Q8NG31 2342 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 CFAP46Q8IYW2 2715 aa9.89□□□□□ -0.83
RPAP1-205ENST00000563293 MAST4O15021 2626 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 O00370 1275 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 DDX3XO00571 662 aaKnown RBP eCLIP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 SH3BP5O60239 455 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 TUBB4AP04350 444 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 CKMP06732 381 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 PDGFRBP09619 1106 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 H2AFZP0C0S5 128 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 PNMA6AP0CW24 399 aaPredicted RBP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 UNGP13051 313 aaPredicted RBP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 LMO2P25791 158 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 MAGEA1P43355 309 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 NSFP46459 744 aaKnown RBP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 CLEC16AQ2KHT3 1053 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 CCDC122Q5T0U0 273 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 LYSMD4Q5XG99 296 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ACAD10Q6JQN1 1059 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 RAD9BQ6WBX8 426 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 CCNI2Q6ZMN8 369 aaPredicted RBP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 H2AFVQ71UI9 128 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ACOT1Q86TX2 421 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ZSCAN30Q86W11 494 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 OSTM1Q86WC4 334 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ADGRG2Q8IZP9 1017 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ELMO3Q96BJ8 720 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 LRIG1Q96JA1 1093 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 HSFY1Q96LI6 401 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 MYRFLQ96LU7 910 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 CEP295NLQ96MC4 621 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ZNF830Q96NB3 372 aaPredicted RBP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 TWNKQ96RR1 684 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ISCUQ9H1K1 167 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ABCB6Q9NP58 842 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 SEPT11Q9NVA2 429 aaKnown RBP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 LCMT1Q9UIC8 334 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ZMYM5Q9UJ78 669 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 HCN2Q9UL51 889 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 STRIP2Q9ULQ0 834 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.88□□□□□ -0.83
RPAP1-205ENST00000563293 PCDHA13Q9Y5I0 950 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
RPAP1-205ENST00000563293 SHROOM3Q8TF72 1996 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 A0A087X0T9 212 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 TRAV19A0A0A6YYK7 116 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 ANKRD62A6NC57 917 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 BTNL10A8MVZ5 291 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 LEFTY2O00292 366 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 PRB1P04280 392 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 CYP17A1P05093 508 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 CALB1P05937 261 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 MMEP08473 750 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 PLEKP08567 350 aaPredicted RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 FAM228BP0C875 321 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 CSH1P0DML2 217 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 CSH2P0DML3 217 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 CHRNB2P17787 502 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 BRD2P25440 801 aaKnown RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 MSNP26038 577 aaKnown RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 KIR2DL1P43626 348 aaPredicted RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 ACADSBP45954 432 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 BCAT1P54687 386 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 USP46P62068 366 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 CENPCQ03188 943 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 GFPT1Q06210 699 aaPredicted RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 C1QBPQ07021 282 aaKnown RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 BST2Q10589 180 aaKnown RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 KIF5AQ12840 1032 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 IFI16Q16666 785 aaKnown RBP9.87□□□□□ -0.83
RPAP1-205ENST00000563293 CFAP221Q4G0U5 840 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 TAF3Q5VWG9 929 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 VSTM1Q6UX27 236 aa9.87□□□□□ -0.83
RPAP1-205ENST00000563293 KIAA1328Q86T90 577 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms