RNA–Protein interactions for RNA: ENST00000562881.1

FAN1-204, Transcript of FANCD2 and FANCI associated nuclease 1, humanhuman

TSL 3

Gene FAN1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAN1-204ENST00000562881 VPS52Q8N1B4 723 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 SLC39A11Q8N1S5 342 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 ATAD1Q8NBU5 361 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 RIN2Q8WYP3 895 aaPredicted RBP13.12□□□□□ -0.31
FAN1-204ENST00000562881 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
FAN1-204ENST00000562881 PGM2Q96G03 612 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 OLFM3Q96PB7 478 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
FAN1-204ENST00000562881 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 CDC42EP4Q9H3Q1 356 aaKnown RBP13.12□□□□□ -0.31
FAN1-204ENST00000562881 SEMA4AQ9H3S1 761 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
FAN1-204ENST00000562881 PSD3Q9NYI0 1048 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 DTLQ9NZJ0 730 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 OR12D3Q9UGF7 316 aa13.12□□□□□ -0.31
FAN1-204ENST00000562881 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
FAN1-204ENST00000562881 NT5C1B-RDH14C9J2C7 533 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 ALOX15BO15296 676 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 TP73O15350 636 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 OPHN1O60890 802 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 TCEA3O75764 348 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 URODP06132 367 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 ZSCAN5DPP0CG00 497 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 ERCC2P18074 760 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 RBL1P28749 1068 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 PHBP35232 272 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 MAGEA4P43358 317 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 PPP3CCP48454 512 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 RABGGTBP53611 331 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 BASP1P80723 227 aaKnown RBP13.11□□□□□ -0.31
FAN1-204ENST00000562881 DSG1Q02413 1049 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 IFRD2Q12894 506 aaPredicted RBP13.11□□□□□ -0.31
FAN1-204ENST00000562881 DNAJC21Q5F1R6 531 aaKnown RBP13.11□□□□□ -0.31
FAN1-204ENST00000562881 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 ARHGEF18Q6ZSZ5 1173 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 DDX53Q86TM3 631 aaKnown RBP13.11□□□□□ -0.31
FAN1-204ENST00000562881 PYROXD2Q8N2H3 581 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 RIBC1Q8N443 379 aaPredicted RBP13.11□□□□□ -0.31
FAN1-204ENST00000562881 ATP6V0D2Q8N8Y2 350 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 NAT8LQ8N9F0 302 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 COLGALT1Q8NBJ5 622 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 MCUQ8NE86 351 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 ADAM32Q8TC27 787 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 HTR3CQ8WXA8 447 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 CPT1BQ92523 772 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 TBC1D31Q96DN5 1066 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 PGLYRP2Q96PD5 576 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 VAT1Q99536 393 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 RETREG1Q9H6L5 497 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 PCDHB12Q9Y5F1 795 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 CLUHO75153 1309 aa13.11□□□□□ -0.31
FAN1-204ENST00000562881 A0A087WUV0 522 aaPredicted RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 TRIM43BA6NCK2 446 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 RASGRF2O14827 1237 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 SPAG6O75602 509 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 CSH1P0DML2 217 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 CSH2P0DML3 217 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 ETS1P14921 441 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 CSF2RAP15509 400 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 TPSB2P20231 275 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 EPHB2P29323 1055 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 HOXC13P31276 330 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 CHKAP35790 457 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 GDF10P55107 478 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 GBE1Q04446 702 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 RING1Q06587 406 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 VEPH1Q14D04 833 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 PRKD1Q15139 912 aaPredicted RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 TRIP4Q15650 581 aaPredicted RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 TPSAB1Q15661 275 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 HABP4Q5JVS0 413 aaKnown RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 EMC10Q5UCC4 262 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 ATP11CQ8NB49 1132 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 GLIS1Q8NBF1 620 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 TRIM43Q96BQ3 446 aaPredicted RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 LRRC39Q96DD0 335 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 UBE2OQ9C0C9 1292 aaKnown RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 EPB41L4BQ9H329 900 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 RC3H2Q9HBD1 1191 aaKnown RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 SAYSD1Q9NPB0 183 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 GMIPQ9P107 970 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
FAN1-204ENST00000562881 ADAM21Q9UKJ8 722 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
FAN1-204ENST00000562881 A0A0A0MRY4 1105 aa13.09□□□□□ -0.31
FAN1-204ENST00000562881 SLC38A8A6NNN8 435 aa13.09□□□□□ -0.31
FAN1-204ENST00000562881 E7ESA3 106 aa13.09□□□□□ -0.31
FAN1-204ENST00000562881 RGS16O15492 202 aaPredicted RBP13.09□□□□□ -0.31
FAN1-204ENST00000562881 MFSD11O43934 449 aa13.09□□□□□ -0.31
FAN1-204ENST00000562881 AGTP01019 485 aa13.09□□□□□ -0.31
FAN1-204ENST00000562881 GSTA2P09210 222 aa13.09□□□□□ -0.31
FAN1-204ENST00000562881 ELF1P32519 619 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms