RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 CHSY1Q86X52 802 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 ATP6V0D2Q8N8Y2 350 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 SUMF1Q8NBK3 374 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 SLC30A5Q8TAD4 765 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 AZIN2Q96A70 460 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 BTN2A3PQ96KV6 586 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 PRICKLE1Q96MT3 831 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-206ENST00000562610 C11orf70Q9BRQ4 267 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 SLC2A11Q9BYW1 496 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 TPSD1Q9BZJ3 242 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 CIPCQ9C0C6 399 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 POLMQ9NP87 494 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-206ENST00000562610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.74■□□□□ 0.27
COMMD4-206ENST00000562610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.74■□□□□ 0.27
COMMD4-206ENST00000562610 STIM2Q9P246 746 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 XPO7Q9UIA9 1087 aaKnown RBP16.74■□□□□ 0.27
COMMD4-206ENST00000562610 FBXO10Q9UK96 956 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 SLC27A6Q9Y2P4 619 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 PIEZO1Q92508 2521 aa16.74■□□□□ 0.27
COMMD4-206ENST00000562610 DOCK4Q8N1I0 1966 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 CCDC163A0A0D9SF12 145 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 A0A1W2PQC6 194 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 TCRBV21S2A2A0A5A6 115 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 LRRC53A6NM62 1247 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 M0QYT0 321 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 GFRA2O00451 464 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 ADAM23O75077 832 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 ALDH1A2O94788 518 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 CYP1A1P04798 512 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-206ENST00000562610 CCDC172P0C7W6 258 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 SLC2A3P11169 496 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 ABCB4P21439 1286 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 NTSR1P30989 418 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 CCR1P32246 355 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 CNR2P34972 360 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 SCNN1AP37088 669 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 NSFP46459 744 aaKnown RBP16.73■□□□□ 0.27
COMMD4-206ENST00000562610 PIK3R6Q5UE93 754 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 RAP1GAP2Q684P5 730 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 SDE2Q6IQ49 451 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 KCNV2Q8TDN2 545 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 UCMAQ8WVF2 138 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 ERLEC1Q96DZ1 483 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 ACOX2Q99424 681 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 METTL5Q9NRN9 209 aaKnown RBP16.73■□□□□ 0.27
COMMD4-206ENST00000562610 CACNA2D2Q9NY47 1150 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 RRN3Q9NYV6 651 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 BCCIPQ9P287 314 aaKnown RBP eCLIP16.73■□□□□ 0.27
COMMD4-206ENST00000562610 SLC12A6Q9UHW9 1150 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 STARD13Q9Y3M8 1113 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 NUP205Q92621 2012 aa16.73■□□□□ 0.27
COMMD4-206ENST00000562610 ZFHX2Q9C0A1 2572 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-206ENST00000562610 F5H5T6 163 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 RPP40O75818 363 aaKnown RBP16.72■□□□□ 0.27
COMMD4-206ENST00000562610 HNRNPLP14866 589 aaKnown RBP eCLIP16.72■□□□□ 0.27
COMMD4-206ENST00000562610 TACR2P21452 398 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 MS4A13Q5J8X5 152 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-206ENST00000562610 PHLDB2Q86SQ0 1253 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 MFN1Q8IWA4 741 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 CCDC117Q8IWD4 279 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-206ENST00000562610 LGI2Q8N0V4 545 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 MDGA1Q8NFP4 955 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 HMGB4Q8WW32 186 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 GAB3Q8WWW8 586 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 BAP1Q92560 729 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 AGPAT1Q99943 283 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 IRX2Q9BZI1 471 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-206ENST00000562610 ABCB8Q9NUT2 735 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 HCN2Q9UL51 889 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 MYO6Q9UM54 1294 aa16.72■□□□□ 0.27
COMMD4-206ENST00000562610 TNRC6BQ9UPQ9 1833 aaKnown RBP16.71■□□□□ 0.27
COMMD4-206ENST00000562610 KCNU1A8MYU2 1149 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 HRO43593 1189 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 TFE3P19532 575 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-206ENST00000562610 MMP8P22894 467 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 HLA-FP30511 346 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 FLT3P36888 993 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 UBASH3AP57075 661 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 RPS24P62847 133 aaKnown RBP16.71■□□□□ 0.27
COMMD4-206ENST00000562610 CENPCQ03188 943 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 CDH18Q13634 790 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 NR1I3Q14994 352 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 EIF4HQ15056 248 aaKnown RBP16.71■□□□□ 0.27
COMMD4-206ENST00000562610 ASIC2Q16515 512 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 CLEC16AQ2KHT3 1053 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 MPP7Q5T2T1 576 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 OTUD1Q5VV17 481 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-206ENST00000562610 SND1Q7KZF4 910 aaKnown RBP eCLIP16.71■□□□□ 0.27
COMMD4-206ENST00000562610 CFAP52Q8N1V2 620 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 PGBD3Q8N328 593 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 CARNMT1Q8N4J0 409 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 ZNF557Q8N988 423 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-206ENST00000562610 WFDC5Q8TCV5 224 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 RUBCNQ92622 972 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 PCDHB18PQ96TA0 734 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 TBCBQ99426 244 aa16.71■□□□□ 0.27
COMMD4-206ENST00000562610 NPY6RQ99463 290 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms