RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ATMINO43313 823 aaPredicted RBP13.92□□□□□ -0.18
CDH1-204ENST00000562118 APOEP02649 317 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 SGSHP51688 502 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 ATXN1P54253 815 aaKnown RBP13.92□□□□□ -0.18
CDH1-204ENST00000562118 GALCP54803 685 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 RNASE9P60153 205 aaKnown RBP13.92□□□□□ -0.18
CDH1-204ENST00000562118 MESP2Q0VG99 397 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 C15orf59Q2T9L4 293 aaPredicted RBP13.92□□□□□ -0.18
CDH1-204ENST00000562118 RAB6CQ53S08 254 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 MS4A13Q5J8X5 152 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 CCDC170Q8IYT3 715 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 SYNPOQ8N3V7 929 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 ARFGAP1Q8N6T3 406 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDH1-204ENST00000562118 NIPA2Q8N8Q9 360 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 CD101Q93033 1021 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 PBXIP1Q96AQ6 731 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 MYEOVQ96EZ4 313 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 HAPLN3Q96S86 360 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 LRFN3Q9BTN0 628 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 SLC2A11Q9BYW1 496 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 RAB6CQ9H0N0 254 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 INTUQ9ULD6 942 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 NEU3Q9UQ49 428 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 PAXBP1Q9Y5B6 917 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 FAM86C2PA6NEL3 165 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.91□□□□□ -0.18
CDH1-204ENST00000562118 CCP110O43303 1012 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 PI15O43692 258 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 TULP3O75386 442 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 MTA2O94776 668 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 TMEM253P0C7T8 217 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 TYRP14679 529 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 DRD1P21728 446 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 CD72P21854 359 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 GALK1P51570 392 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 AIF1P55008 147 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 VCPP55072 806 aaKnown RBP13.91□□□□□ -0.18
CDH1-204ENST00000562118 DEUP1Q05D60 604 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 ACAP1Q15027 740 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 TSR1Q2NL82 804 aaKnown RBP13.91□□□□□ -0.18
CDH1-204ENST00000562118 MPPE1Q53F39 396 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 CCDC122Q5T0U0 273 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 C10orf76Q5T2E6 689 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 SH3PXD2AQ5TCZ1 1133 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 MANEALQ5VSG8 457 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 CYP4V2Q6ZWL3 525 aaPredicted RBP13.91□□□□□ -0.18
CDH1-204ENST00000562118 PHLDB2Q86SQ0 1253 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 TMEM105Q8N8V8 129 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 ATP6V0D2Q8N8Y2 350 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 TTC8Q8TAM2 541 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 FAM172AQ8WUF8 416 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 ARHGEF26Q96DR7 871 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 CCDC42Q96M95 316 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 P2RY13Q9BPV8 354 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 DDX50Q9BQ39 737 aaKnown RBP13.91□□□□□ -0.18
CDH1-204ENST00000562118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDH1-204ENST00000562118 TRIM7Q9C029 511 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 CHRDQ9H2X0 955 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 GRPEL1Q9HAV7 217 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 MRPL47Q9HD33 250 aaKnown RBP13.91□□□□□ -0.18
CDH1-204ENST00000562118 ZNF212Q9UDV6 495 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 STARD13Q9Y3M8 1113 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 SIT1Q9Y3P8 196 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 HS3ST4Q9Y661 456 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 FANCMQ8IYD8 2048 aa13.91□□□□□ -0.18
CDH1-204ENST00000562118 MYO15AQ9UKN7 3530 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 GOLGA6L7A0A1B0GV03 622 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 FAM170BA6NMN3 283 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 K7EQS6 105 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 PAGE1O75459 146 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 PAPSS2O95340 614 aaPredicted RBP13.9□□□□□ -0.18
CDH1-204ENST00000562118 ABCB4P21439 1286 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 TACR2P21452 398 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 SLC6A11P48066 632 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 NME3Q13232 169 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 PON2Q15165 354 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 FBXO43Q4G163 708 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 DGKKQ5KSL6 1271 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 TTC39BQ5VTQ0 682 aaPredicted RBP13.9□□□□□ -0.18
CDH1-204ENST00000562118 TMTC1Q8IUR5 882 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 TERB1Q8NA31 727 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 EXOC4Q96A65 974 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 BBS2Q9BXC9 721 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 PACSIN1Q9BY11 444 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 TKTL2Q9H0I9 626 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 OSBPL2Q9H1P3 480 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 WDCPQ9H6R7 721 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 UVRAGQ9P2Y5 699 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 HCN2Q9UL51 889 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 CKAP5Q14008 2032 aa13.9□□□□□ -0.18
CDH1-204ENST00000562118 NYNRINQ9P2P1 1898 aaKnown RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 DRGXA6NNA5 263 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 CHURC1-FNTBB4DL54 471 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 EIF3CLB5ME19 914 aaKnown RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 NEDD8-MDP1E9PL57 170 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 AKR1B10O60218 316 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms