RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 XP32Q5T750 250 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 GRAMD4Q6IC98 578 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CLEC18BQ6UXF7 455 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.66□□□□□ -1.5
HERC1-213ENST00000561359 CACUL1Q86Y37 369 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 KIAA1958Q8N8K9 716 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CLEC18CQ8NCF0 446 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 RFFLQ8WZ73 363 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 EXTL1Q92935 676 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 SIPA1Q96FS4 1042 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 KLHDC7BQ96G42 594 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ZBTB45Q96K62 511 aaPredicted RBP5.66□□□□□ -1.5
HERC1-213ENST00000561359 MYRFLQ96LU7 910 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 RNF26Q9BY78 433 aaPredicted RBP5.66□□□□□ -1.5
HERC1-213ENST00000561359 CEP41Q9BYV8 373 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 MKRN2Q9H000 416 aaKnown RBP5.66□□□□□ -1.5
HERC1-213ENST00000561359 POLR1BQ9H9Y6 1135 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 PLEKHA5Q9HAU0 1116 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 ITM2CQ9NQX7 267 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 DNAJC17Q9NVM6 304 aaKnown RBP5.66□□□□□ -1.5
HERC1-213ENST00000561359 TRPM5Q9NZQ8 1165 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 TBC1D14Q9P2M4 693 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 PCDHA12Q9UN75 941 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CPQQ9Y646 472 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CELSR2Q9HCU4 2923 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 CRYBG3Q68DQ2 2970 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 BSNQ9UPA5 3926 aa5.66□□□□□ -1.5
HERC1-213ENST00000561359 F8P00451 2351 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 GFRA2O00451 464 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 CYB561D2O14569 222 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 DDX3YO15523 660 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 HOXC11O43248 304 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 NDUFB5O43674 189 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 SYNCRIPO60506 623 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 PPFIA2O75334 1257 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 GSPT1P15170 499 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 CKMT2P17540 419 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 CYP3A5P20815 502 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 PAX3P23760 479 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 RBMS1P29558 406 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 MATR3P43243 847 aaKnown RBP eCLIP5.65□□□□□ -1.5
HERC1-213ENST00000561359 SLC7A9P82251 487 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 E2F1Q01094 437 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 EXOSC10Q01780 885 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 PPP2R3AQ06190 1150 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 NFE2Q16621 373 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 ARL13BQ3SXY8 428 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 WSCD1Q658N2 575 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 USP53Q70EK8 1073 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 DDX42Q86XP3 938 aaKnown RBP eCLIP5.65□□□□□ -1.5
HERC1-213ENST00000561359 PTRH1Q86Y79 214 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 TMPRSS6Q8IU80 811 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 SCN4BQ8IWT1 228 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 TMEM102Q8N9M5 508 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 NSUN7Q8NE18 718 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 UBASH3BQ8TF42 649 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 PRCCQ92733 491 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 KIFAP3Q92845 792 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 CCNL2Q96S94 520 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 ELF4Q99607 663 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 NAP1L4Q99733 375 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 PYM1Q9BRP8 204 aaKnown RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 ACE2Q9BYF1 805 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 PCED1AQ9H1Q7 454 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 EPN3Q9H201 632 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 C6orf106Q9H6K1 298 aaPredicted RBP5.65□□□□□ -1.5
HERC1-213ENST00000561359 ASCL3Q9NQ33 180 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 TMLHEQ9NVH6 421 aa5.65□□□□□ -1.5
HERC1-213ENST00000561359 MYLKQ15746 1914 aa5.65□□□□□ -1.51
HERC1-213ENST00000561359 PHLPP2Q6ZVD8 1323 aa5.65□□□□□ -1.51
HERC1-213ENST00000561359 MYOFQ9NZM1 2061 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 MTORP42345 2549 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 TTC26A0AVF1 554 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 LACTBL1A8MY62 500 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 PRRT4C9JH25 899 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 ABLIM1O14639 778 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 YKT6O15498 198 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SART1O43290 800 aaKnown RBP5.64□□□□□ -1.51
HERC1-213ENST00000561359 TOM1L1O75674 476 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 FSBPO95073 299 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 NEFLP07196 543 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 CLTAP09496 248 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 MBL2P11226 248 aaPredicted RBP5.64□□□□□ -1.51
HERC1-213ENST00000561359 IFNAR1P17181 557 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 PFKLP17858 780 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 PROZP22891 400 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 CD27P26842 260 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 TXKP42681 527 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 NPTX2P47972 431 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 ARRB1P49407 418 aaPredicted RBP5.64□□□□□ -1.51
HERC1-213ENST00000561359 PEX3P56589 373 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 MYL7Q01449 175 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 ST3GAL1Q11201 340 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 NCAPHQ15003 741 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 ZBTB6Q15916 424 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SKIDA1Q1XH10 827 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 TTC22Q5TAA0 569 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 C9orf57Q5W0N0 161 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 GALNT17Q6IS24 598 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 PIK3AP1Q6ZUJ8 805 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms