RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ITGBL1O95965 494 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 SERPINA6P08185 405 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 AOC1P19801 751 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 PSMA2P25787 234 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 PEX2P28328 305 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 CDKN2BP42772 138 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 GTF2A2P52657 109 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 NR1H2P55055 460 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 MTTPP55157 894 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 CCL15Q16663 113 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 TFDP3Q5H9I0 405 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 MARCH8Q5T0T0 291 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 ATG16L1Q676U5 607 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 TRIM67Q6ZTA4 783 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 TMC7Q7Z402 723 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 POLNQ7Z5Q5 900 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 PCGF5Q86SE9 256 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 ERI1Q8IV48 349 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 CATSPER1Q8NEC5 780 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 ZFP28Q8NHY6 868 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 RAB3IL1Q8TBN0 382 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 FNIP1Q8TF40 1166 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 BRI3BPQ8WY22 251 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 ACSF2Q96CM8 615 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 TMEM176AQ96HP8 235 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 HPDLQ96IR7 371 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 CPXM1Q96SM3 734 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 PAFAH2Q99487 392 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 PLGRKTQ9HBL7 147 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 DDX18Q9NVP1 670 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 CNTN3Q9P232 1028 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 LZTS1Q9Y250 596 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 CITO14578 2027 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 KAT6AQ92794 2004 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 IQANK1A0A1B0GTG1 560 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 C3orf70A6NLC5 250 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 MICAL2O94851 1124 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 ERBB2P04626 1255 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 HOXD8P13378 290 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 P4HA1P13674 534 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 SMPD1P17405 629 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 SLC18A2Q05940 514 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 BTKQ06187 659 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 PPIDQ08752 370 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 APOFQ13790 326 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 FASTKD3Q14CZ7 662 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 TRIP10Q15642 601 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 GRIK4Q16099 956 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 RNASEH2BQ5TBB1 312 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 LPCAT4Q643R3 524 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 LRRC8BQ6P9F7 803 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 FBXL19Q6PCT2 694 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 XYLT1Q86Y38 959 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 METTL25Q8N6Q8 603 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 ARFGAP1Q8N6T3 406 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 DQX1Q8TE96 717 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 TRPC4APQ8TEL6 797 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 SNRNP27Q8WVK2 155 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 CLPTM1LQ96KA5 538 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 CORO1BQ9BR76 489 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 SENP6Q9GZR1 1112 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 BRD8Q9H0E9 1235 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 ARHGEF38Q9NXL2 777 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 C6orf203Q9P0P8 240 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 ADAMTS6Q9UKP5 1117 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 DTNAQ9Y4J8 743 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 AK5Q9Y6K8 562 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 FAM237BA0A1B0GVD1 139 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 IQCA1LA6NCM1 817 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 STK10O94804 968 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 MT-ND3P03897 115 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 CPOXP36551 454 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 HSPA13P48723 471 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 GRB14Q14449 540 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 MYLK3Q32MK0 819 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 DUSP28Q4G0W2 176 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 GRAMD4Q6IC98 578 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 PACS1Q6VY07 963 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 KIAA0319LQ8IZA0 1049 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 GSTCDQ8NEC7 633 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 FBXO27Q8NI29 283 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 ITPKCQ96DU7 683 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 CCDC97Q96F63 343 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 ACAP3Q96P50 834 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 ITGA11Q9UKX5 1188 aa14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 FAF1Q9UNN5 650 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 DRG1Q9Y295 367 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-220ENST00000560998 LRCH4O75427 683 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 FAM155BO75949 473 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 STAU1O95793 577 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 MMP3P08254 477 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 VDRP11473 427 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 BGNP21810 368 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 VCPP55072 806 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 GPX6P59796 221 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 RBP5P82980 135 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms