RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 JMJD4Q9H9V9 463 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 TCP11L1Q9NUJ3 509 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 POLR3BQ9NW08 1133 aaPredicted RBP4.24□□□□□ -1.73
HERC1-211ENST00000560983 STK39Q9UEW8 545 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 EXOC6BQ9Y2D4 811 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 SH3BP1Q9Y3L3 701 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 PIAS3Q9Y6X2 628 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 APC2O95996 2303 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 SDK1Q7Z5N4 2213 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 C2orf78A6NCI8 922 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 TRABD2BA6NFA1 517 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 ENO4A6NNW6 628 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 M0R2C6 588 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 NRP1O14786 923 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 CAPN9O14815 690 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 RANBP6O60518 1105 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 STAM2O75886 525 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 RHOBTB1O94844 696 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 SLC3A2P08195 630 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 CCDC192P0DO97 292 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 ZSCAN20P17040 1043 aaPredicted RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 KRT4P19013 534 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 GNAT2P19087 354 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 POU3F2P20265 443 aaPredicted RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 SLC25A3Q00325 362 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 DSG1Q02413 1049 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 HHEXQ03014 270 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 SLFN5Q08AF3 891 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 C2orf27AQ580R0 203 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 NOMO2Q5JPE7 1267 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 RRP12Q5JTH9 1297 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 GPATCH4Q5T3I0 446 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 ZSCAN25Q6NSZ9 544 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 PDXDC1Q6P996 788 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 HTR3DQ70Z44 454 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 SGMS1Q86VZ5 419 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 MARCH9Q86YJ5 346 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 IGSF22Q8N9C0 903 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 OR5AN1Q8NGI8 311 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 WDR48Q8TAF3 677 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 THAP3Q8WTV1 239 aaPredicted RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 MCRS1Q96EZ8 462 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 MBOAT7Q96N66 472 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 GPHA2Q96T91 129 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 HERC2P3Q9BVR0 1158 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 TRMT61BQ9BVS5 477 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 MMRN2Q9H8L6 949 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 BRD9Q9H8M2 597 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 NCOA5Q9HCD5 579 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 VAT1LQ9HCJ6 419 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 CHST12Q9NRB3 414 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 HCFC1R1Q9NWW0 138 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 MARCH5Q9NX47 278 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 GDE1Q9NZC3 331 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 DNMT3BQ9UBC3 853 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 SSX2IPQ9Y2D8 614 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 FNDC1Q4ZHG4 1894 aaPredicted RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 NOTCH2Q04721 2471 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 MGAQ8IWI9 3026 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 LAMA4Q16363 1823 aa4.23□□□□□ -1.73
HERC1-211ENST00000560983 URB1O60287 2271 aaKnown RBP4.23□□□□□ -1.73
HERC1-211ENST00000560983 FRMPD4Q14CM0 1322 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 DOPEY1Q5JWR5 2465 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 CAPN14A8MX76 684 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 F8W810 466 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 GCOM1H8Y6P7 765 aaPredicted RBP4.22□□□□□ -1.73
HERC1-211ENST00000560983 CCL16O15467 120 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 RNF113AO15541 343 aaKnown RBP4.22□□□□□ -1.73
HERC1-211ENST00000560983 ORC4O43929 436 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 HIP1RO75146 1068 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 VTNP04004 478 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 URODP06132 367 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 HNRNPA1P09651 372 aaKnown RBP eCLIP4.22□□□□□ -1.73
HERC1-211ENST00000560983 POLR2MP0CAP2 368 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 GP1BBP13224 206 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 CD59P13987 128 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 TRIM27P14373 513 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 RPL17P18621 184 aaKnown RBP4.22□□□□□ -1.73
HERC1-211ENST00000560983 MAKP20794 623 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 GDI1P31150 447 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 ABCG1P45844 678 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 ANTXR2P58335 489 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 LRRC32Q14392 662 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 TRIP6Q15654 476 aaKnown RBP4.22□□□□□ -1.73
HERC1-211ENST00000560983 ARHGAP44Q17R89 818 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 SLC5A9Q2M3M2 681 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 LONRF3Q496Y0 759 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 GAGE13Q4V321 117 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 FAM78AQ5JUQ0 283 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 DGKKQ5KSL6 1271 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 VITQ6UXI7 678 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 ZNF627Q7L945 461 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 PLPPR4Q7Z2D5 763 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 TMC8Q8IU68 726 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 ERC1Q8IUD2 1116 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 ULK2Q8IYT8 1036 aa4.22□□□□□ -1.73
HERC1-211ENST00000560983 TRMT2AQ8IZ69 625 aaKnown RBP4.22□□□□□ -1.73
HERC1-211ENST00000560983 SYNPOQ8N3V7 929 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms