RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ENC1O14682 589 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 YKT6O15498 198 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 FSBPO95073 299 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 LDOC1O95751 146 aaPredicted RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 ATP5BP06576 529 aaKnown RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 DLDP09622 509 aaKnown RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 ITPKBP27987 946 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 PIK3CAP42336 1068 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 HARS2P49590 506 aaKnown RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 SFSWAPQ12872 951 aaKnown RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 CCDC157Q569K6 752 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 PPP1R26Q5T8A7 1209 aaPredicted RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 KIAA0895LQ68EN5 471 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 SHC4Q6S5L8 630 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 RSRC2Q7L4I2 434 aaKnown RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 ADIPOR2Q86V24 386 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 AHI1Q8N157 1196 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 ELF4Q99607 663 aaPredicted RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 IRX2Q9BZI1 471 aaPredicted RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 OLA1Q9NTK5 396 aaKnown RBP19.37■□□□□ 0.69
TPM1-226ENST00000560959 NCKAP1Q9Y2A7 1128 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 MYH10P35580 1976 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 A0A1W2PPC4 97 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 MAPK13O15264 365 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 RFPL3O75679 317 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 KIF20AO95235 890 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 LATS1O95835 1130 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 IGHV4-34P06331 123 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 SLFN14P0C7P3 912 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 YWHAGP61981 247 aaKnown RBP eCLIP19.36■□□□□ 0.69
TPM1-226ENST00000560959 ENPEPQ07075 957 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 C1orf220Q5T0J3 134 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 PM20D1Q6GTS8 502 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 CHST9Q7L1S5 443 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 TTC39CQ8N584 583 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 SNIP1Q8TAD8 396 aaKnown RBP19.36■□□□□ 0.69
TPM1-226ENST00000560959 BAP1Q92560 729 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 TMA16Q96EY4 203 aaKnown RBP19.36■□□□□ 0.69
TPM1-226ENST00000560959 INTS4Q96HW7 963 aaKnown RBP19.36■□□□□ 0.69
TPM1-226ENST00000560959 BLZF1Q9H2G9 400 aa19.36■□□□□ 0.69
TPM1-226ENST00000560959 APOBEC3GQ9HC16 384 aaKnown RBP19.36■□□□□ 0.69
TPM1-226ENST00000560959 COL5A1P20908 1838 aaPredicted RBP19.36■□□□□ 0.69
TPM1-226ENST00000560959 TEX51A0A1B0GUA7 166 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 CAPN9O14815 690 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 POLR2DO15514 142 aaKnown RBP19.35■□□□□ 0.69
TPM1-226ENST00000560959 TLX3O43711 291 aaPredicted RBP19.35■□□□□ 0.69
TPM1-226ENST00000560959 YEATS4O95619 227 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 CASP1P29466 404 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 ILKQ13418 452 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 MPP7Q5T2T1 576 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 ZNF776Q68DI1 518 aaPredicted RBP19.35■□□□□ 0.69
TPM1-226ENST00000560959 LAYNQ6UX15 382 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 ZNF605Q86T29 641 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 SAP25Q8TEE9 199 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 CYB5D2Q8WUJ1 264 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 TSC1Q92574 1164 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 CNDP2Q96KP4 475 aaKnown RBP19.35■□□□□ 0.69
TPM1-226ENST00000560959 ARID3AQ99856 593 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 NIF3L1Q9GZT8 377 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 RSPH9Q9H1X1 276 aaPredicted RBP19.35■□□□□ 0.69
TPM1-226ENST00000560959 KCTD10Q9H3F6 313 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 GGA2Q9UJY4 613 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 TPX2Q9ULW0 747 aaKnown RBP19.35■□□□□ 0.69
TPM1-226ENST00000560959 FRMD4BQ9Y2L6 1034 aa19.35■□□□□ 0.69
TPM1-226ENST00000560959 HBS1LQ9Y450 684 aaKnown RBP19.35■□□□□ 0.69
TPM1-226ENST00000560959 NUMA1Q14980 2115 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 NR3C1P04150 777 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 ITGAVP06756 1048 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 PABPC1P11940 636 aaKnown RBP19.34■□□□□ 0.69
TPM1-226ENST00000560959 PLA2G2AP14555 144 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 IL9RQ01113 521 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 TARDBPQ13148 414 aaKnown RBP eCLIP19.34■□□□□ 0.69
TPM1-226ENST00000560959 CUL4BQ13620 913 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 ADGRF1Q5T601 910 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 MBLAC2Q68D91 279 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 ZNF557Q8N988 423 aaPredicted RBP19.34■□□□□ 0.69
TPM1-226ENST00000560959 HEXIM2Q96MH2 286 aaKnown RBP19.34■□□□□ 0.69
TPM1-226ENST00000560959 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
TPM1-226ENST00000560959 FCRL3Q96P31 734 aaPredicted RBP19.34■□□□□ 0.69
TPM1-226ENST00000560959 ABCB8Q9NUT2 735 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 RAI2Q9Y5P3 530 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 AK5Q9Y6K8 562 aa19.34■□□□□ 0.69
TPM1-226ENST00000560959 SHROOM3Q8TF72 1996 aa19.33■□□□□ 0.69
TPM1-226ENST00000560959 C10orf142B7Z368 130 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 ZBED1O96006 694 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 ABCB4P21439 1286 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 ACADVLP49748 655 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 VAMP7P51809 220 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 GALCP54803 685 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 SLC8A3P57103 927 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 SEMG2Q02383 582 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 STK4Q13043 487 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 ARHGAP17Q68EM7 881 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 FBXL19Q6PCT2 694 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 GPR155Q7Z3F1 870 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 PIGZQ86VD9 579 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 ZNF366Q8N895 744 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 ANKRD52Q8NB46 1076 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 CCDC150Q8NCX0 1101 aa19.33■□□□□ 0.68
TPM1-226ENST00000560959 FGF11Q92914 225 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms