RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SERPINB8P50452 374 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 TPD52P55327 224 aaPredicted RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 RNASELQ05823 741 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 DCTN2Q13561 401 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 CYLC2Q14093 348 aaPredicted RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 R3HDM1Q15032 1099 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 SLC2A7Q6PXP3 512 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 ATG9AQ7Z3C6 839 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 CYP4X1Q8N118 509 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF507Q8TCN5 953 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 INPP5DQ92835 1189 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 CCDC42Q96M95 316 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 JAM3Q9BX67 310 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 TMEM160Q9NX00 188 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 PTTG2Q9NZH5 202 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 CICQ96RK0 1608 aaPredicted RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 E7EWF7 191 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 RGS13O14921 159 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 KERAO60938 352 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 FAPQ12884 760 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 TMEM201Q5SNT2 666 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 ADGRD1Q6QNK2 874 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 UNQ6494/PRO21346Q6UXR6 183 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 KCNK18Q7Z418 384 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 SMYD4Q8IYR2 804 aaPredicted RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 VPS52Q8N1B4 723 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 LSM14AQ8ND56 463 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 GABPB2Q8TAK5 448 aaPredicted RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 TTYH3Q9C0H2 523 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 DNAI2Q9GZS0 605 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 BRF2Q9HAW0 419 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 PCDHB16Q9NRJ7 776 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 TBC1D23Q9NUY8 699 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 FAIMQ9NVQ4 179 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 C5AR2Q9P296 337 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF609O15014 1411 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 PASKQ96RG2 1323 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 A0A0B4J203 849 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 KANSL1LA0AUZ9 987 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 PROM1O43490 865 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ENTPD5O75356 428 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 UBTFL6P0CB48 400 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ZCCHC18P0CG32 403 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CYP19A1P11511 503 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 GAP43P17677 238 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 GNAT2P19087 354 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ARPC4P59998 168 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 GRIN1Q05586 938 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 UBE3CQ15386 1083 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SF3B3Q15393 1217 aaKnown RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CCDC6Q16204 474 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 INAQ16352 499 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 FSCN1Q16658 493 aaKnown RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 PDCD4Q53EL6 469 aaKnown RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 KRT40Q6A162 431 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 FAM117BQ6P1L5 589 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 FIP1L1Q6UN15 594 aaKnown RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CRTC1Q6UUV9 634 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 PACS1Q6VY07 963 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 Q6ZVU0 165 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 PTF1AQ7RTS3 328 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 DZIP1Q86YF9 867 aaKnown RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 RIBC1Q8N443 379 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SCAMP5Q8TAC9 235 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 NRG4Q8WWG1 115 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 INPP4AQ96PE3 977 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 OSBPL10Q9BXB5 764 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SENP6Q9GZR1 1112 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ASCC2Q9H1I8 757 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 NEUROG2Q9H2A3 272 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 DENND2DQ9H6A0 471 aaPredicted RBP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 LRRC4CQ9HCJ2 640 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 AGPAT5Q9NUQ2 364 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 FGFR1OP2Q9NVK5 253 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 PCDHB1Q9Y5F3 818 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SPATA31A1Q5TZJ5 1347 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 LAMA4Q16363 1823 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SMIM31A0A1B0GVY4 71 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 H0YAE9 185 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SYT5O00445 386 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 LCA5LO95447 670 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CSF1RP07333 972 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 NFKBIAP25963 317 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 GSK3AP49840 483 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 EMP3P54852 163 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CREB5Q02930 508 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ITGA9Q13797 1035 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 SPIDRQ14159 915 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 GIT2Q14161 759 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 RCN1Q15293 331 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ADRM1Q16186 407 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 NEPROQ6NW34 567 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 CHST3Q7LGC8 479 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 PEX5LQ8IYB4 626 aa6.97□□□□□ -1.29
TSPAN3-209ENST00000560715 ST13P4Q8IZP2 240 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms