RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 MAP3K6O95382 1288 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 EN2P19622 333 aaPredicted RBP23.25■■□□□ 1.31
PBX1-218ENST00000560469 FPGSQ05932 587 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 CEP85LQ5SZL2 805 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 B4GALNT4Q76KP1 1039 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 C16orf59Q7L2K0 433 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 CPT1BQ92523 772 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 PRCCQ92733 491 aaPredicted RBP23.25■■□□□ 1.31
PBX1-218ENST00000560469 CDC42EP4Q9H3Q1 356 aaKnown RBP23.25■■□□□ 1.31
PBX1-218ENST00000560469 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.25■■□□□ 1.31
PBX1-218ENST00000560469 MFHAS1Q9Y4C4 1052 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 PCDHB12Q9Y5F1 795 aa23.25■■□□□ 1.31
PBX1-218ENST00000560469 ZNF638Q14966 1978 aaKnown RBP23.24■■□□□ 1.31
PBX1-218ENST00000560469 PPP1R12AO14974 1030 aaPredicted RBP23.24■■□□□ 1.31
PBX1-218ENST00000560469 POLR3GO15318 223 aaPredicted RBP23.24■■□□□ 1.31
PBX1-218ENST00000560469 MSI1O43347 362 aaKnown RBP23.24■■□□□ 1.31
PBX1-218ENST00000560469 ATF6P18850 670 aa23.24■■□□□ 1.31
PBX1-218ENST00000560469 IFFO1Q0D2I5 559 aa23.24■■□□□ 1.31
PBX1-218ENST00000560469 HEATR6Q6AI08 1181 aaKnown RBP23.24■■□□□ 1.31
PBX1-218ENST00000560469 NAT8LQ8N9F0 302 aa23.24■■□□□ 1.31
PBX1-218ENST00000560469 GIPC2Q8TF65 315 aa23.24■■□□□ 1.31
PBX1-218ENST00000560469 PHACTR1Q9C0D0 580 aa23.24■■□□□ 1.31
PBX1-218ENST00000560469 NUDT5Q9UKK9 219 aa23.24■■□□□ 1.31
PBX1-218ENST00000560469 PTPRSQ13332 1948 aa23.24■■□□□ 1.31
PBX1-218ENST00000560469 KCNU1A8MYU2 1149 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 NCAM2O15394 837 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 GCATO75600 419 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 LRIG2O94898 1065 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 GJB5O95377 273 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 ZDHHC11BP0C7U3 371 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 SERPINB6P35237 376 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 HTRA4P83105 476 aaPredicted RBP23.23■■□□□ 1.31
PBX1-218ENST00000560469 ZNF844Q08AG5 666 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 SLC29A2Q14542 456 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 SLC39A13Q96H72 371 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 RBM15Q96T37 977 aaKnown RBP eCLIP23.23■■□□□ 1.31
PBX1-218ENST00000560469 UBE2OQ9C0C9 1292 aaKnown RBP23.23■■□□□ 1.31
PBX1-218ENST00000560469 MCOLN1Q9GZU1 580 aa23.23■■□□□ 1.31
PBX1-218ENST00000560469 C5orf60A6NFR6 353 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 PAGE1O75459 146 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 EPHB2P29323 1055 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 TBX4P57082 545 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 BASP1P80723 227 aaKnown RBP23.22■■□□□ 1.31
PBX1-218ENST00000560469 RAB33AQ14088 237 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 RASIP1Q5U651 963 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 CROCCP2Q86T23 111 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 VPS52Q8N1B4 723 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 FIBCD1Q8N539 461 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 PDZD8Q8NEN9 1154 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 OR2W6PQ8NHA6 318 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 HTR3CQ8WXA8 447 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 OVCA2Q8WZ82 227 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 BADQ92934 168 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 CDK5RAP1Q96SZ6 601 aaKnown RBP23.22■■□□□ 1.31
PBX1-218ENST00000560469 BRD8Q9H0E9 1235 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.22■■□□□ 1.31
PBX1-218ENST00000560469 VPS18Q9P253 973 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 TTC4O95801 387 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 MYZAPP0CAP1 466 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 NRG1Q02297 640 aaPredicted RBP23.22■■□□□ 1.31
PBX1-218ENST00000560469 CREMQ03060 361 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 PRKD1Q15139 912 aaPredicted RBP23.22■■□□□ 1.31
PBX1-218ENST00000560469 CENPUQ71F23 418 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 ZNF276Q8N554 614 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 PWWP2AQ96N64 755 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 KLC2Q9H0B6 622 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 TMBIM4Q9HC24 238 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 MRPL17Q9NRX2 175 aaKnown RBP23.22■■□□□ 1.31
PBX1-218ENST00000560469 MAFFQ9ULX9 164 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 SNX10Q9Y5X0 201 aa23.22■■□□□ 1.31
PBX1-218ENST00000560469 KIAA1671Q9BY89 1806 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 CHADO15335 359 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 STK10O94804 968 aaKnown RBP23.21■■□□□ 1.31
PBX1-218ENST00000560469 SEC24AO95486 1093 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 MX2P20592 715 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 NRLP54845 237 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 EFEMP1Q12805 493 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 TRIP4Q15650 581 aaPredicted RBP23.21■■□□□ 1.31
PBX1-218ENST00000560469 PSRC1Q6PGN9 363 aaPredicted RBP23.21■■□□□ 1.31
PBX1-218ENST00000560469 FCRL2Q96LA5 508 aaPredicted RBP23.21■■□□□ 1.31
PBX1-218ENST00000560469 C1orf74Q96LT6 269 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 SIK2Q9H0K1 926 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 DNAJC17Q9NVM6 304 aaKnown RBP23.21■■□□□ 1.31
PBX1-218ENST00000560469 FNIP2Q9P278 1114 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 SLC12A6Q9UHW9 1150 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 MAGED2Q9UNF1 606 aaPredicted RBP23.21■■□□□ 1.31
PBX1-218ENST00000560469 SSX2IPQ9Y2D8 614 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 INSL6Q9Y581 213 aa23.21■■□□□ 1.31
PBX1-218ENST00000560469 EIF3HO15372 352 aaKnown RBP eCLIP23.2■■□□□ 1.3
PBX1-218ENST00000560469 FGF10O15520 208 aaPredicted RBP23.2■■□□□ 1.3
PBX1-218ENST00000560469 APOEP02649 317 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 CSH1P0DML2 217 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 CSH2P0DML3 217 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 HOXC13P31276 330 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 MAGEA4P43358 317 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 ARL4CP56559 192 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 C10orf120Q5SQS8 335 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 PPP1R21Q6ZMI0 780 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 TADA2BQ86TJ2 420 aa23.2■■□□□ 1.3
PBX1-218ENST00000560469 ARL8AQ96BM9 186 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms