RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SLC2A11Q9BYW1 496 aa15.79■□□□□ 0.12
SNRPA1-210ENST00000560383 SMOC1Q9H4F8 434 aa15.79■□□□□ 0.12
SNRPA1-210ENST00000560383 FAM207AQ9NSI2 230 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-210ENST00000560383 PLK2Q9NYY3 685 aa15.79■□□□□ 0.12
SNRPA1-210ENST00000560383 CEP83Q9Y592 693 aa15.79■□□□□ 0.12
SNRPA1-210ENST00000560383 TPRP12270 2363 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 EPG5Q9HCE0 2579 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 TCRBV21S2A2A0A5A6 115 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 LNP1A1A4G5 178 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 PRRT4C9JH25 899 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 CYBBP04839 570 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 ATP1A3P13637 1013 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 CDK11BP21127 795 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 BCKDHBP21953 392 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 NTSR1P30989 418 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 DPP6P42658 865 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 TBX4P57082 545 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 SNX16P57768 344 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 SYCP1Q15431 976 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 PTPN20Q4JDL3 420 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 EFHC1Q5JVL4 640 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 TCEAL6Q6IPX3 200 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 OLFML1Q6UWY5 402 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 NOP9Q86U38 636 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 DHX40Q8IX18 779 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 TMEM35BQ8NCS4 154 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 ZNF397Q8NF99 534 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 EPS8L1Q8TE68 723 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 BHMTQ93088 406 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 TCEAL3Q969E4 200 aa15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 BCCIPQ9P287 314 aaKnown RBP eCLIP15.78■□□□□ 0.12
SNRPA1-210ENST00000560383 CEP192Q8TEP8 1941 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 CAPN9O14815 690 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 IRAK2O43187 625 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 ACSL4O60488 711 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 HSF2BPO75031 334 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 LSM8O95777 96 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 ERBB2P04626 1255 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 HOXB2P14652 356 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 HOXD9P28356 352 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 HOXD12P35452 270 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 GABRB2P47870 512 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 SLC11A2P49281 568 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 POLR2FP61218 127 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 UBXN1Q04323 297 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 TAF5Q15542 800 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 MAP7D1Q3KQU3 841 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 FAM133BQ5BKY9 247 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 MPP7Q5T2T1 576 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 FAM183BPQ6ZVS7 135 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 LPCAT2Q7L5N7 544 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 SLC26A9Q7LBE3 791 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 TAC4Q86UU9 113 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 ZNF677Q86XU0 584 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 ZDHHC17Q8IUH5 632 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 IPO4Q8TEX9 1081 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 DDI1Q8WTU0 396 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 HMGB4Q8WW32 186 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 EVLQ9UI08 416 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 NOCTQ9UK39 431 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 CLEC4EQ9ULY5 219 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 INVSQ9Y283 1065 aa15.77■□□□□ 0.12
SNRPA1-210ENST00000560383 KMT2BQ9UMN6 2715 aaPredicted RBP15.77■□□□□ 0.11
SNRPA1-210ENST00000560383 A0A1W2PQF6 199 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 SMTNL1A8MU46 457 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 KHNYNO15037 678 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 TRUB2O95900 331 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 PTMSP20962 102 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 SOX5P35711 763 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 SCNN1AP37088 669 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 ZNF165P49910 485 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 SLC6A3Q01959 620 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 PIK3R6Q5UE93 754 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 PEAR1Q5VY43 1037 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 TMA16Q96EY4 203 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 CNTNAP3BQ96NU0 1288 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 GABRG3Q99928 467 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 CNTNAP3Q9BZ76 1288 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 CD248Q9HCU0 757 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 ZDHHC4Q9NPG8 344 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 CHD8Q9HCK8 2581 aa15.76■□□□□ 0.11
SNRPA1-210ENST00000560383 NPC1O15118 1278 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 GFPT2O94808 682 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 GABRG2P18507 467 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 SLC6A4P31645 630 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 STAT1P42224 750 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 DHPSP49366 369 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 PITX1P78337 314 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 CDR2Q01850 454 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 ENPP2Q13822 863 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 IQCB1Q15051 598 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 EIF4HQ15056 248 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 GEN1Q17RS7 908 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 DCAF6Q58WW2 860 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 TAF3Q5VWG9 929 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 DAB2IPQ5VWQ8 1189 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 EGFLAMQ63HQ2 1017 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 NADSYN1Q6IA69 706 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 OR6B2Q6IFH4 312 aa15.75■□□□□ 0.11
SNRPA1-210ENST00000560383 SDE2Q6IQ49 451 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms