RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ITGA9Q13797 1035 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 LRRC4BQ9NT99 713 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 DNMT3LQ9UJW3 386 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 RICTORQ6R327 1708 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 MYH8P13535 1937 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 EIF3HO15372 352 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CYP3A4P08684 503 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SLC6A3Q01959 620 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 ACAP1Q15027 740 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 USP45Q70EL2 814 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SLC22A9Q8IVM8 553 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 DEFB118Q96PH6 123 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 SCN3BQ9NY72 215 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 TAS2R13Q9NYV9 303 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 CTNNAL1Q9UBT7 734 aa13.79□□□□□ -0.2
TRAF3-208ENST00000560371 APOA1P02647 267 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 AMPD1P23109 780 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 FLT3LGP49771 235 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 PWP1Q13610 501 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 NR6A1Q15406 480 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 TMEM119Q4V9L6 283 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 ARMC12Q5T9G4 340 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 C11orf74Q86VG3 221 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 GALNT4Q8N4A0 578 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 AGXT2Q9BYV1 514 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 NUDT5Q9UKK9 219 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 ADH1AP07327 375 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 OR56A5P0C7T3 313 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 RARGP13631 454 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 WDR18Q9BV38 432 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 RAB23Q9ULC3 237 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 TNNI3P19429 210 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 NOS2P35228 1153 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 HECTD3Q5T447 861 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 HTR3CQ8WXA8 447 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 SH3GL1Q99961 368 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 PCDH9Q9HC56 1237 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 GEMIN8Q9NWZ8 242 aaKnown RBP13.78□□□□□ -0.2
TRAF3-208ENST00000560371 SERPINA4P29622 427 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 XRCC4Q13426 336 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 NSL1Q96IY1 281 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 TRPC4Q9UBN4 977 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 MORC2Q9Y6X9 1032 aaPredicted RBP13.78□□□□□ -0.2
TRAF3-208ENST00000560371 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 E5RJQ4 531 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 TOMM70O94826 608 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 PRLRP16471 622 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 NPR3P17342 541 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 EARS2Q5JPH6 523 aaKnown RBP13.78□□□□□ -0.2
TRAF3-208ENST00000560371 MAP4K3Q8IVH8 894 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
TRAF3-208ENST00000560371 VGLL2Q8N8G2 317 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 UROC1Q96N76 676 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 NLNQ9BYT8 704 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 RAD51BO15315 384 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 NDUFS2O75306 463 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 MTA2O94776 668 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 KRT8P05787 483 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 SERPINB5P36952 375 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 PPP1R16AQ96I34 528 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 PARVBQ9HBI1 364 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 HES2Q9Y543 173 aa13.78□□□□□ -0.2
TRAF3-208ENST00000560371 GSTM1P09488 218 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 PSMA4P25789 261 aaKnown RBP13.77□□□□□ -0.2
TRAF3-208ENST00000560371 MGAT5Q09328 741 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 MCOLN3Q8TDD5 553 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 HELQQ8TDG4 1101 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 PHF21BQ96EK2 531 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 TUBGCP4Q9UGJ1 667 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 MYO18AQ92614 2054 aaKnown RBP13.77□□□□□ -0.2
TRAF3-208ENST00000560371 PIK3CDO00329 1044 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 PPP2R1BP30154 601 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 PPM1AP35813 382 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 CD151P48509 253 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 ACTN3Q08043 901 aaPredicted RBP13.77□□□□□ -0.2
TRAF3-208ENST00000560371 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.2
TRAF3-208ENST00000560371 PLD3Q8IV08 490 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 PPP1R14AQ96A00 147 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 OLFM3Q96PB7 478 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 ULBP1Q9BZM6 244 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 EFCAB1Q9HAE3 211 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 TMCC3Q9ULS5 477 aa13.77□□□□□ -0.2
TRAF3-208ENST00000560371 WTIPA6NIX2 430 aaPredicted RBP13.77□□□□□ -0.21
TRAF3-208ENST00000560371 A8MX80 341 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 ALBP02768 609 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 ZNF135P52742 658 aaPredicted RBP13.77□□□□□ -0.21
TRAF3-208ENST00000560371 LRRC8DQ7L1W4 858 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 TRAPPC5Q8IUR0 188 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 SPATA20Q8TB22 786 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 ERLEC1Q96DZ1 483 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 PANX3Q96QZ0 392 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 PRKD2Q9BZL6 878 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 CCDC134Q9H6E4 229 aa13.77□□□□□ -0.21
TRAF3-208ENST00000560371 SH3BP4Q9P0V3 963 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms