RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ZBTB16Q05516 673 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 SLC39A14Q15043 492 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 TTC31Q49AM3 519 aaPredicted RBP17.36■□□□□ 0.37
HERC1-207ENST00000560316 FAM217AQ8IXS0 508 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 ZC3H3Q8IXZ2 948 aaKnown RBP17.36■□□□□ 0.37
HERC1-207ENST00000560316 GANCQ8TET4 914 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 DHX58Q96C10 678 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 MTG2Q9H4K7 406 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 EBF2Q9HAK2 575 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 ABCB8Q9NUT2 735 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 NAV2Q8IVL1 2488 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 A0A1W2PPC4 97 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 RPN1P04843 607 aaKnown RBP17.35■□□□□ 0.37
HERC1-207ENST00000560316 CDK4P11802 303 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 AMPD3Q01432 767 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 EHHADHQ08426 723 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 KNOP1Q1ED39 458 aaKnown RBP17.35■□□□□ 0.37
HERC1-207ENST00000560316 ZACNQ401N2 412 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 C8orf34Q49A92 452 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 MPPE1Q53F39 396 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 ZNF776Q68DI1 518 aaPredicted RBP17.35■□□□□ 0.37
HERC1-207ENST00000560316 RSRC2Q7L4I2 434 aaKnown RBP17.35■□□□□ 0.37
HERC1-207ENST00000560316 ADIPOR2Q86V24 386 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 SPACA3Q8IXA5 215 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 WFIKKN2Q8TEU8 576 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 TSC1Q92574 1164 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 TMEM176AQ96HP8 235 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 NT5C1AQ9BXI3 368 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 DUSP16Q9BY84 665 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 FBRSQ9HAH7 460 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 CGNQ9P2M7 1197 aaKnown RBP17.35■□□□□ 0.37
HERC1-207ENST00000560316 STRIP2Q9ULQ0 834 aa17.35■□□□□ 0.37
HERC1-207ENST00000560316 WNT9AO14904 365 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 ASS1P00966 412 aaKnown RBP17.34■□□□□ 0.37
HERC1-207ENST00000560316 NEFLP07196 543 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 CD58P19256 250 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 TRIM21P19474 475 aaKnown RBP17.34■□□□□ 0.37
HERC1-207ENST00000560316 INCA1Q0VD86 236 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 TAF1BQ53T94 588 aaPredicted RBP17.34■□□□□ 0.37
HERC1-207ENST00000560316 PPP1R26Q5T8A7 1209 aaPredicted RBP17.34■□□□□ 0.37
HERC1-207ENST00000560316 MBLAC2Q68D91 279 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 CNNM4Q6P4Q7 775 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 NCEH1Q6PIU2 408 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 UNC13DQ70J99 1090 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 TAF4BQ92750 862 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 C7orf25Q9BPX7 421 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 BLZF1Q9H2G9 400 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 AASDHPPTQ9NRN7 309 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 SERGEFQ9UGK8 458 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 GGA2Q9UJY4 613 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 NCKAP1Q9Y2A7 1128 aa17.34■□□□□ 0.37
HERC1-207ENST00000560316 PYCARD-AS1I3L0S3 204 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 HLA-DRAP01903 254 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 PABPC1P11940 636 aaKnown RBP17.33■□□□□ 0.36
HERC1-207ENST00000560316 PIK3CAP42336 1068 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 SGSHP51688 502 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 GALCP54803 685 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 BNIP3Q12983 259 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 SV2AQ7L0J3 742 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 ERICH1Q86X53 443 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 GOLGA1Q92805 767 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 SKA1Q96BD8 255 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 PLD4Q96BZ4 506 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 PABPC3Q9H361 631 aaKnown RBP17.33■□□□□ 0.36
HERC1-207ENST00000560316 CUEDC2Q9H467 287 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 APOBEC3GQ9HC16 384 aaKnown RBP17.33■□□□□ 0.36
HERC1-207ENST00000560316 FBXL12Q9NXK8 326 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 MORC2Q9Y6X9 1032 aaPredicted RBP17.33■□□□□ 0.36
HERC1-207ENST00000560316 MYO18BQ8IUG5 2567 aa17.33■□□□□ 0.36
HERC1-207ENST00000560316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 ERVH48-1M5A8F1 160 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 DLDP09622 509 aaKnown RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 GLDCP23378 1020 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 CD38P28907 300 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 EPHA8P29322 1005 aaPredicted RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 ACTN2P35609 894 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 YWHAGP61981 247 aaKnown RBP eCLIP17.32■□□□□ 0.36
HERC1-207ENST00000560316 PDE4CQ08493 712 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 KCNH2Q12809 1159 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 KCNJ12Q14500 433 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 TRIP4Q15650 581 aaPredicted RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 TBC1D25Q3MII6 688 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 USP30Q70CQ3 517 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 KIAA0907Q7Z7F0 614 aaPredicted RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 AHI1Q8N157 1196 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.32■□□□□ 0.36
HERC1-207ENST00000560316 WFDC5Q8TCV5 224 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 NDRG1Q92597 394 aaKnown RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 RSPH9Q9H1X1 276 aaPredicted RBP17.32■□□□□ 0.36
HERC1-207ENST00000560316 GDF3Q9NR23 364 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 DMAC2Q9NW81 257 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 SUN2Q9UH99 717 aa17.32■□□□□ 0.36
HERC1-207ENST00000560316 A0A1W2PP55 124 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 A0A1W2PR77 199 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 CAPN8A6NHC0 703 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 ATP5BP06576 529 aaKnown RBP17.31■□□□□ 0.36
HERC1-207ENST00000560316 CD70P32970 193 aa17.31■□□□□ 0.36
HERC1-207ENST00000560316 HARS2P49590 506 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 846.9 ms