RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RPL7AP62424 266 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 ATP11AP98196 1134 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 SCAPQ12770 1279 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 SLC12A1Q13621 1099 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 ANO4Q32M45 955 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 LY6G5CQ5SRR4 150 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 TPRG1Q6ZUI0 275 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 EMC1Q8N766 993 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 JOSD2Q8TAC2 188 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 DDI1Q8WTU0 396 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 FAM172AQ8WUF8 416 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 RFFLQ8WZ73 363 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 FAM3CQ92520 227 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 CD101Q93033 1021 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 PNKPQ96T60 521 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 P2RY13Q9BPV8 354 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 TKTL2Q9H0I9 626 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 OSBPL2Q9H1P3 480 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 HEBP1Q9NRV9 189 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 CTTNBP2NLQ9P2B4 639 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 DEC1Q9P2X7 70 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 MYO1AQ9UBC5 1043 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 SLC27A6Q9Y2P4 619 aa12.49□□□□□ -0.41
RABGGTA-215ENST00000560207 BTNL10A8MVZ5 291 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 PRR33A8MZF0 331 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 NPC1O15118 1278 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 TIMM44O43615 452 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 ATG13O75143 517 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 TYRP14679 529 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 ARSAP15289 507 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 MAN1A1P33908 653 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 ADRA1BP35368 520 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 RPS9P46781 194 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 TNK2Q07912 1038 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 HADHQ16836 314 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 C5orf22Q49AR2 442 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 HSF5Q4G112 596 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 BOLA3Q53S33 107 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 MS4A13Q5J8X5 152 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 EFHC2Q5JST6 749 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 PIK3R6Q5UE93 754 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 TRIM68Q6AZZ1 485 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 SLFN11Q7Z7L1 901 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 RIN3Q8TB24 985 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 ZNF564Q8TBZ8 553 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 ASIC4Q96FT7 647 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 SPTLC3Q9NUV7 552 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 CA14Q9ULX7 337 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
RABGGTA-215ENST00000560207 SYNJ2BP-COX16A0A087WUM0 186 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 A0A1B0GVM2 712 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 TCAF2A6NFQ2 919 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 NEDD8-MDP1E9PL57 170 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 GFRA2O00451 464 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 STK25O00506 426 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 DLL1O00548 723 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 CCP110O43303 1012 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 PRPSAP2O60256 369 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 PAGE1O75459 146 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 CLDN11O75508 207 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 MOCS2O96007 188 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 APODP05090 189 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 TACR2P21452 398 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 GRIA2P42262 883 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 SLC1A1P43005 524 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 TNFRSF4P43489 277 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 HDAC4P56524 1084 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 DMC1Q14565 340 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 EIF4HQ15056 248 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 CDO1Q16878 200 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 FAM133BQ5BKY9 247 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 RNF43Q68DV7 783 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 CHST9Q7L1S5 443 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 TRMT11Q7Z4G4 463 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 CHSY1Q86X52 802 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 TMEM25Q86YD3 366 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 FBXL6Q8N531 539 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 WFIKKN2Q8TEU8 576 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 UCMAQ8WVF2 138 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 PBXIP1Q96AQ6 731 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 PRRX2Q99811 253 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 TBC1D17Q9HA65 648 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 LTB4R2Q9NPC1 389 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 COX16Q9P0S2 106 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 PPARGC1AQ9UBK2 798 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 FBXO10Q9UK96 956 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 CUL9Q8IWT3 2517 aa12.47□□□□□ -0.41
RABGGTA-215ENST00000560207 KRBA1A5PL33 1030 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 TULP3O75386 442 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 MOCS3O95396 460 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms