RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TRIM24O15164 1050 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 ZBTB24O43167 697 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-225ENST00000560005 HOXC11O43248 304 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-225ENST00000560005 CACNA2D1P54289 1103 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 JAM2P57087 298 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 ANO4Q32M45 955 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 PREPLQ4J6C6 727 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-225ENST00000560005 EGFLAMQ63HQ2 1017 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 E4F1Q66K89 784 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-225ENST00000560005 SLCO6A1Q86UG4 719 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 OTUB2Q96DC9 234 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 ZNF419Q96HQ0 510 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-225ENST00000560005 DEF6Q9H4E7 631 aa21.51■■□□□ 1.03
PSEN1-225ENST00000560005 NHEJ1Q9H9Q4 299 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-225ENST00000560005 EIF4E1BA6NMX2 242 aaKnown RBP21.5■■□□□ 1.03
PSEN1-225ENST00000560005 EIF3CLB5ME19 914 aaKnown RBP21.5■■□□□ 1.03
PSEN1-225ENST00000560005 GFPT2O94808 682 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 NDUFA10O95299 355 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 WARSP23381 471 aaKnown RBP21.5■■□□□ 1.03
PSEN1-225ENST00000560005 MAOBP27338 520 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 SOX5P35711 763 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 KLHL30Q0D2K2 578 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 GRIK2Q13002 908 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 SPA17Q15506 151 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 TOGARAM2Q6ZUX3 1019 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 NUDT18Q6ZVK8 323 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 BBS7Q8IWZ6 715 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 CHPFQ8IZ52 775 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 OR5B17Q8NGF7 314 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 IPO4Q8TEX9 1081 aaKnown RBP21.5■■□□□ 1.03
PSEN1-225ENST00000560005 ZNF516Q92618 1163 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 FAXDC2Q96IV6 333 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 ZFRQ96KR1 1074 aaKnown RBP21.5■■□□□ 1.03
PSEN1-225ENST00000560005 ACOX2Q99424 681 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 EIF3CQ99613 913 aaKnown RBP21.5■■□□□ 1.03
PSEN1-225ENST00000560005 CHP1Q99653 195 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 CD248Q9HCU0 757 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 UBE2TQ9NPD8 197 aaPredicted RBP21.5■■□□□ 1.03
PSEN1-225ENST00000560005 TMEM30AQ9NV96 361 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 SUSD2Q9UGT4 822 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 PPP2R2CQ9Y2T4 447 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 SH3BP1Q9Y3L3 701 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 PTPRJQ12913 1337 aa21.5■■□□□ 1.03
PSEN1-225ENST00000560005 ASXL3Q9C0F0 2248 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 URB1O60287 2271 aaKnown RBP21.49■■□□□ 1.03
PSEN1-225ENST00000560005 COCHO43405 550 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 CBFA2T3O75081 653 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 NDUFS2O75306 463 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 GNSP15586 552 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 CLCN1P35523 988 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 PRKCIP41743 596 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 PIK3CAP42336 1068 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 GCNT1Q02742 428 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 DRAP1Q14919 205 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-225ENST00000560005 SYCP2LQ5T4T6 812 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 RAD9BQ6WBX8 426 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 TMEM25Q86YD3 366 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 TAS1R2Q8TE23 839 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 TAF4BQ92750 862 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 MMS19Q96T76 1030 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 SLC6A17Q9H1V8 727 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 SCUBE2Q9NQ36 999 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 SPHK2Q9NRA0 654 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 PCOLCE2Q9UKZ9 415 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 STARD13Q9Y3M8 1113 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 NME7Q9Y5B8 376 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 ADGRG1Q9Y653 693 aa21.49■■□□□ 1.03
PSEN1-225ENST00000560005 PTPRBP23467 1997 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 AKR1B10O60218 316 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 HLA-DRAP01903 254 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 TBXAS1P24557 533 aaPredicted RBP21.48■■□□□ 1.03
PSEN1-225ENST00000560005 YWHAQP27348 245 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 TRPC3Q13507 836 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 SGSM1Q2NKQ1 1148 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 TDRD12Q587J7 1177 aaKnown RBP21.48■■□□□ 1.03
PSEN1-225ENST00000560005 SDE2Q6IQ49 451 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 GLRX5Q86SX6 157 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 MRPL45Q9BRJ2 306 aaKnown RBP21.48■■□□□ 1.03
PSEN1-225ENST00000560005 ZNF518BQ9C0D4 1074 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 RAD54BQ9Y620 910 aa21.48■■□□□ 1.03
PSEN1-225ENST00000560005 F8VZ95 297 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 WDR45BQ5MNZ6 344 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 GRAMD4Q6IC98 578 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 TRAPPC11Q7Z392 1133 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 IRF2BP2Q7Z5L9 587 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 SETD7Q8WTS6 366 aaKnown RBP21.47■■□□□ 1.03
PSEN1-225ENST00000560005 SEMA4DQ92854 862 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 FOXJ1Q92949 421 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 FBXO32Q969P5 355 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 ZDHHC5Q9C0B5 715 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 ELOVL4Q9GZR5 314 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 SNX25Q9H3E2 840 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 DNAJC17Q9NVM6 304 aaKnown RBP21.47■■□□□ 1.03
PSEN1-225ENST00000560005 ARHGAP20Q9P2F6 1191 aa21.47■■□□□ 1.03
PSEN1-225ENST00000560005 LCA5LO95447 670 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 IRF1P10914 325 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 GNL1P36915 607 aaPredicted RBP21.46■■□□□ 1.03
PSEN1-225ENST00000560005 EIF4A3P38919 411 aaKnown RBP21.46■■□□□ 1.03
PSEN1-225ENST00000560005 NCOA4Q13772 614 aa21.46■■□□□ 1.03
PSEN1-225ENST00000560005 HECTD3Q5T447 861 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms