RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 DSPP15924 2871 aaKnown RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 ENGP17813 658 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 MYH10P35580 1976 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 PI4KAP42356 2102 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 WASP42768 502 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 AFMP43652 599 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 NDST1P52848 882 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 MCCD1P59942 119 aaPredicted RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 AMPD3Q01432 767 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 GAD2Q05329 585 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SEMA3BQ13214 749 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 TRPC3Q13507 836 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 NCOA4Q13772 614 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 ZNF699Q32M78 642 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 ARSJQ5FYB0 599 aaPredicted RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 ZNF667Q5HYK9 610 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SPDYCQ5MJ68 293 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 EOGTQ5NDL2 527 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 UNQ6494/PRO21346Q6UXR6 183 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SCARA5Q6ZMJ2 495 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 CLEC20AQ6ZU45 233 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 TOGARAM2Q6ZUX3 1019 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 HTR3DQ70Z44 454 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 LPCAT2Q7L5N7 544 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SCD5Q86SK9 330 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 C11orf74Q86VG3 221 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 TTC30AQ86WT1 665 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 DDX42Q86XP3 938 aaKnown RBP eCLIP6.12□□□□□ -1.43
USP3-215ENST00000559771 SYT12Q8IV01 421 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SLC9A9Q8IVB4 645 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SLC41A1Q8IVJ1 513 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 DEFB119Q8N690 84 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 ZNF513Q8N8E2 541 aaPredicted RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 RBBP8NLQ8NC74 664 aaPredicted RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 PDZD8Q8NEN9 1154 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 OR2I1PQ8NGU4 316 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SLC2A14Q8TDB8 520 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 FOXD4L4Q8WXT5 416 aaPredicted RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 OTUB2Q96DC9 234 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SMARCD1Q96GM5 515 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 PAGE5Q96GU1 130 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 GABRG3Q99928 467 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SCNM1Q9BWG6 230 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 SLC6A17Q9H1V8 727 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 MAGEF1Q9HAY2 307 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 APOBEC3GQ9HC16 384 aaKnown RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 DMAP1Q9NPF5 467 aaPredicted RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 KRT82Q9NSB4 513 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 FAM49BQ9NUQ9 324 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 COMMD8Q9NX08 183 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 CALCOCO1Q9P1Z2 691 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 CGNQ9P2M7 1197 aaKnown RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 SERTAD1Q9UHV2 236 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 FBXO10Q9UK96 956 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 ZMIZ1Q9ULJ6 1067 aa6.12□□□□□ -1.43
USP3-215ENST00000559771 R3HCC1Q9Y3T6 440 aaKnown RBP6.12□□□□□ -1.43
USP3-215ENST00000559771 IGF2RP11717 2491 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 SPAARA0A1B0GVQ0 90 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 TBC1D3BA6NDS4 549 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 UPK3BL1B0FP48 263 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.11□□□□□ -1.43
USP3-215ENST00000559771 WASH3PC4AMC7 463 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 UPK3BL2E5RIL1 263 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 TLR5O60602 858 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 GJB3O75712 270 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 ALDH1A2O94788 518 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 F13A1P00488 732 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 SLFN14P0C7P3 912 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 IRF1P10914 325 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 CD59P13987 128 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 HOXB2P14652 356 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 TYRP14679 529 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 MAPK8P45983 427 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 MAP3K7CLP57077 242 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 PPP3CAQ08209 521 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 BIRC3Q13489 604 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 ANO4Q32M45 955 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 UAP1L1Q3KQV9 507 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 C10orf76Q5T2E6 689 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 DAB2IPQ5VWQ8 1189 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 LYSMD4Q5XG99 296 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 ZDHHC13Q8IUH4 622 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 DMRTC2Q8IXT2 367 aaPredicted RBP6.11□□□□□ -1.43
USP3-215ENST00000559771 IPO4Q8TEX9 1081 aaKnown RBP6.11□□□□□ -1.43
USP3-215ENST00000559771 ERLEC1Q96DZ1 483 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 TNIP3Q96KP6 325 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 MRGPRX1Q96LB2 322 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 ZNF396Q96N95 335 aaPredicted RBP6.11□□□□□ -1.43
USP3-215ENST00000559771 HNRNPABQ99729 332 aaKnown RBP6.11□□□□□ -1.43
USP3-215ENST00000559771 MED10Q9BTT4 135 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP3-215ENST00000559771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP3-215ENST00000559771 BCCIPQ9P287 314 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP3-215ENST00000559771 DEC1Q9P2X7 70 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 NUDT5Q9UKK9 219 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 RCOR1Q9UKL0 485 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 KLK13Q9UKR3 277 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 CLEC4EQ9ULY5 219 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 SCML2Q9UQR0 700 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms