RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 LAMTOR5O43504 91 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 TBL1XO60907 577 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 CALB1P05937 261 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 TPM3P06753 285 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 SP9P0CG40 484 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 RFC1P35251 1148 aaPredicted RBP19.4■□□□□ 0.7
CASC4-209ENST00000559222 TIE1P35590 1138 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 GRIA2P42262 883 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 KIR2DL1P43626 348 aaPredicted RBP19.4■□□□□ 0.7
CASC4-209ENST00000559222 DGKGP49619 791 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 NUBP1P53384 320 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 ATP11AP98196 1134 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 CSTF1Q05048 431 aaKnown RBP19.4■□□□□ 0.7
CASC4-209ENST00000559222 CDO1Q16878 200 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 GEN1Q17RS7 908 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 SLC25A52Q3SY17 297 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 CCDC14Q49A88 953 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 MS4A13Q5J8X5 152 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 C10orf76Q5T2E6 689 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 WDR59Q6PJI9 974 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 CHSY1Q86X52 802 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 SPEM1Q8N4L4 309 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 CCDC33Q8N5R6 958 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 C3orf20Q8ND61 904 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 SYN2Q92777 582 aaPredicted RBP19.4■□□□□ 0.7
CASC4-209ENST00000559222 AZIN2Q96A70 460 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 XPO6Q96QU8 1125 aaKnown RBP19.4■□□□□ 0.7
CASC4-209ENST00000559222 PRMT1Q99873 361 aaKnown RBP19.4■□□□□ 0.7
CASC4-209ENST00000559222 STIM2Q9P246 746 aa19.4■□□□□ 0.7
CASC4-209ENST00000559222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■□□□□ 9.9
CASC4-209ENST00000559222 A0A0A0MRY4 1105 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 K7ESF4 209 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 SERPING1P05155 500 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 HNRNPLP14866 589 aaKnown RBP eCLIP19.39■□□□□ 0.699e-11■■■■□ 24.8
CASC4-209ENST00000559222 TACR2P21452 398 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 CXCR3P49682 368 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 RPL7AP62424 266 aaKnown RBP19.39■□□□□ 0.69
CASC4-209ENST00000559222 OGDHQ02218 1023 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 DEUP1Q05D60 604 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 MPPE1Q53F39 396 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 PPP1R15BQ5SWA1 713 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 ARTNQ5T4W7 220 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 EGFLAMQ63HQ2 1017 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 RNF43Q68DV7 783 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 DNAJC24Q6P3W2 148 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 TMC6Q7Z403 805 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 C14orf80Q86SX3 495 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 LGI2Q8N0V4 545 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 SYNPOQ8N3V7 929 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 ALLCQ8N6M5 410 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 RNF34Q969K3 372 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 TMA16Q96EY4 203 aaKnown RBP19.39■□□□□ 0.69
CASC4-209ENST00000559222 BTN2A3PQ96KV6 586 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 ACOX2Q99424 681 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 KCNH6Q9H252 994 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.39■□□□□ 0.69
CASC4-209ENST00000559222 STAP1Q9ULZ2 295 aa19.39■□□□□ 0.69
CASC4-209ENST00000559222 TBC1D3BA6NDS4 549 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 PAGE1O75459 146 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 CYBBP04839 570 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 KRT3P12035 628 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 CCR1P32246 355 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 GBP1P32455 592 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 PTPN5P54829 565 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 ADKP55263 362 aaKnown RBP19.38■□□□□ 0.69
CASC4-209ENST00000559222 NHLH1Q02575 133 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 PPP2R5DQ14738 602 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 FBXO43Q4G163 708 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 TMEM215Q68D42 235 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 FAM131BQ86XD5 332 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 ATP6V0D2Q8N8Y2 350 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 IQCDQ96DY2 449 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 ERLEC1Q96DZ1 483 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 PGAP3Q96FM1 320 aaPredicted RBP19.38■□□□□ 0.69
CASC4-209ENST00000559222 MCEEQ96PE7 176 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 SELENOOQ9BVL4 669 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 MAGEB5Q9BZ81 275 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 TRIM7Q9C029 511 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 ARHGEF38Q9NXL2 777 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 ADAMTS1Q9UHI8 967 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 HS3ST4Q9Y661 456 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 R4GN57 208 aa19.38■□□□□ 0.69
CASC4-209ENST00000559222 A0A087X0T9 212 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 CHURC1-FNTBB4DL54 471 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 SGK1O00141 431 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 MFAP3LO75121 409 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 KLF8O95600 359 aaPredicted RBP19.37■□□□□ 0.69
CASC4-209ENST00000559222 FTLP02792 175 aaPredicted RBP19.37■□□□□ 0.69
CASC4-209ENST00000559222 FAM228BP0C875 321 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 PDGFRAP16234 1089 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 HLA-FP30511 346 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 WASP42768 502 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 CXCL12P48061 93 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 PXNP49023 591 aaPredicted RBP19.37■□□□□ 0.69
CASC4-209ENST00000559222 NUMBP49757 651 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 CCR3P51677 355 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 ZNF75DP51815 510 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 TBX2Q13207 712 aaPredicted RBP19.37■□□□□ 0.69
CASC4-209ENST00000559222 ARCQ7LC44 396 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms