RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 KCND1Q9NSA2 647 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CALCOCO1Q9P1Z2 691 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 TRIM10Q9UDY6 481 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ADAMTS1Q9UHI8 967 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 DUSP10Q9Y6W6 482 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 OPHN1O60890 802 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 PHACTR2O75167 634 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 SERPING1P05155 500 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 PGFP49763 221 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 ATXN3P54252 364 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 ZNF33AQ06730 810 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 HECTD3Q5T447 861 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 EGFLAMQ63HQ2 1017 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 SLC36A4Q6YBV0 504 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 ZNF571Q7Z3V5 609 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 RAB44Q7Z6P3 723 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 MINDY1Q8N5J2 469 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 ZNF592Q92610 1267 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 SYN2Q92777 582 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 OTUB2Q96DC9 234 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 CCSER2Q9H7U1 834 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 APOBEC3GQ9HC16 384 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 IL37Q9NZH6 218 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 DEC1Q9P2X7 70 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 CABIN1Q9Y6J0 2220 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 GOLGA4Q13439 2230 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 ASXL3Q9C0F0 2248 aa11.73□□□□□ -0.53
RABGGTA-204ENST00000558376 ARHGAP33O14559 1287 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 ZSCAN12O43309 604 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 AKR1B10O60218 316 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 CLSTN1O94985 981 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 TNNT1P13805 278 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 HOXB2P14652 356 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 NTSR1P30989 418 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 SOX5P35711 763 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 STAT1P42224 750 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 KIF11P52732 1056 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 MYL6P60660 151 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 ACAP1Q15027 740 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 WDR72Q3MJ13 1102 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 C10orf76Q5T2E6 689 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 SNX30Q5VWJ9 437 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 BTBD8Q5XKL5 378 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 NYAP1Q6ZVC0 841 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 TERB1Q8NA31 727 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 B3GALNT2Q8NCR0 500 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 OVCA2Q8WZ82 227 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 LACRTQ9GZZ8 138 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 NUCKS1Q9H1E3 243 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 DEF6Q9H4E7 631 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 CD93Q9NPY3 652 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 SPHK2Q9NRA0 654 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 GMIPQ9P107 970 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 SH3BP1Q9Y3L3 701 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 STARD13Q9Y3M8 1113 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 FREM2Q5SZK8 3169 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 IGSF10Q6WRI0 2623 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 PTPRBP23467 1997 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 A0A087X0T9 212 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 A8MXQ7 604 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 H0Y626 953 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 SH3BP5O60239 455 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 GREM1O60565 184 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 RTN3O95197 1032 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 TRIM16O95361 564 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 ZDHHC11BP0C7U3 371 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 FAM228BP0C875 321 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 IRF1P10914 325 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 PIK3CAP42336 1068 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 CDH8P55286 799 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 NCOA4Q13772 614 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 ANO4Q32M45 955 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 CCDC170Q8IYT3 715 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 XYLT2Q9H1B5 865 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 SLC6A17Q9H1V8 727 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 DNAAF2Q9NVR5 837 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 CYP8B1Q9UNU6 501 aa11.72□□□□□ -0.53
RABGGTA-204ENST00000558376 EIF3CLB5ME19 914 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 FANCGO15287 622 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 CYP26A1O43174 497 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 GJB3O75712 270 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 NDUFV2P19404 249 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 CYLC1P35663 651 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 ARHGAP25P42331 645 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 TNNC1P63316 161 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 ENPEPQ07075 957 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 TRMT11Q7Z4G4 463 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 FAM35AQ86V20 835 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 PDZD8Q8NEN9 1154 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 IPO4Q8TEX9 1081 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 HSPA12BQ96MM6 686 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 NT5C1BQ96P26 610 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 EIF3CQ99613 913 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 PCDHA13Q9Y5I0 950 aa11.71□□□□□ -0.53
RABGGTA-204ENST00000558376 LAMA5O15230 3695 aa11.71□□□□□ -0.54
RABGGTA-204ENST00000558376 PRRT4C9JH25 899 aa11.7□□□□□ -0.54
RABGGTA-204ENST00000558376 STAU1O95793 577 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms