RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 EPHA10Q5JZY3 1008 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 TEKT5Q96M29 485 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 EBF2Q9HAK2 575 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 SPAG4Q9NPE6 437 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 LATS2Q9NRM7 1088 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 HLA-DRAP01903 254 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 RPA1P27694 616 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 FLT3P36888 993 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 RPL14P50914 215 aaKnown RBP12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 GEMP55040 296 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 RPL26P61254 145 aaKnown RBP12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 HPCAP84074 193 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 PPIL2Q13356 520 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 MTM1Q13496 603 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 PMF1Q6P1K2 205 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 NCCRP1Q6ZVX7 275 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 EPHX4Q8IUS5 362 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 RAB42Q8N4Z0 105 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 ETNPPLQ8TBG4 499 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 MNTQ99583 582 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 COMMD9Q9P000 198 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 ZNF222Q9UK12 451 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 AAR2Q9Y312 384 aaKnown RBP12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 ZMYM2Q9UBW7 1377 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 CCDC154A6NI56 674 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 GDF11O95390 407 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 DBTP11182 482 aaKnown RBP12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 PSMD4P55036 377 aaKnown RBP12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 PKNOX1P55347 436 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 NME5P56597 212 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 FIG4Q92562 907 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 TAMM41Q96BW9 452 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 PLK2Q9NYY3 685 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 DNAJB4Q9UDY4 337 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 LIMD1Q9UGP4 676 aa12.04□□□□□ -0.48
CSPG4P12-201ENST00000558282 ELK3P41970 407 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 SRP54P61011 504 aaKnown RBP12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 PSME3P61289 254 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 BMPR2Q13873 1038 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 KIFC1Q9BW19 673 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 DNM1LO00429 736 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 RARAP10276 462 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 QRICH1Q2TAL8 776 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 WDR72Q3MJ13 1102 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 LIN54Q6MZP7 749 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 GPAT2Q6NUI2 795 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 PRR23CQ6ZRP0 262 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 BPIFB6Q8NFQ5 453 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 OSBPL7Q9BZF2 842 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 NIF3L1Q9GZT8 377 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 GNPTGQ9UJJ9 305 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 RNF112Q9ULX5 631 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 DGAT1O75907 488 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 MUTP22033 750 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 ITGA7Q13683 1181 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 MFSD5Q6N075 450 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 ERI1Q8IV48 349 aaKnown RBP12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 KRT78Q8N1N4 520 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 DEPDC4Q8N2C3 294 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 UXS1Q8NBZ7 420 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 CPNE1Q99829 537 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 ITGA11Q9UKX5 1188 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 CSADQ9Y600 493 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 PPRC1Q5VV67 1664 aaKnown RBP12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 FAM237BA0A1B0GVD1 139 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 H0YIN7 160 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 M0QX08 132 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 PSMD12O00232 456 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 AXIN1O15169 862 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 CYP11B1P15538 503 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 ADORA2BP29275 332 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 CRABP2P29373 138 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 RTP1P59025 263 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 SMTNL2Q2TAL5 461 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 SPOUT1Q5T280 376 aaKnown RBP12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 GJB7Q6PEY0 223 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 CATSPER4Q7RTX7 472 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 SH3KBP1Q96B97 665 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 TMEM121Q9BTD3 319 aa12.03□□□□□ -0.48
CSPG4P12-201ENST00000558282 TMEM114B3SHH9 223 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 LOC110117498-PIK3R3F6TDL0 507 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 SHBGP04278 402 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 NEK3P51956 506 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 NDUFAF6Q330K2 333 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 GALNT18Q6P9A2 607 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 ADGRF4Q8IZF3 695 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 FAM47BQ8NA70 645 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 EPB41L4BQ9H329 900 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 SEMA6BQ9H3T3 888 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.48
CSPG4P12-201ENST00000558282 IQGAP1P46940 1657 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 TSPAN4O14817 238 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 NMT2O60551 498 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 ADSLP30566 484 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms