RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 PHF13Q86YI8 300 aaPredicted RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 ETFBKMTQ8IXQ9 262 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 CHPFQ8IZ52 775 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ALLCQ8N6M5 410 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ZNF557Q8N988 423 aaPredicted RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 TXNDC5Q8NBS9 432 aaKnown RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 RXFP2Q8WXD0 754 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ZNF653Q96CK0 615 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ERLEC1Q96DZ1 483 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 RPRD1AQ96P16 312 aaPredicted RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 MCEEQ96PE7 176 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 TBCBQ99426 244 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 TKTL2Q9H0I9 626 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 ZDHHC4Q9NPG8 344 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 AIPL1Q9NZN9 384 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 RAB23Q9ULC3 237 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 CAPN11Q9UMQ6 739 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 BZW2Q9Y6E2 419 aaKnown RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 R4GN57 208 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ZNF318Q5VUA4 2279 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ITIH6Q6UXX5 1313 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ATG2BQ96BY7 2078 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 KCNU1A8MYU2 1149 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 CHURC1-FNTBB4DL54 471 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 K7EQS6 105 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 MOCS3O95396 460 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 PENKP01210 267 aaPredicted RBP9.3□□□□□ -0.92
SPG11-207ENST00000558138 GYPCP04921 128 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 SERPING1P05155 500 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 HOXB2P14652 356 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 GPD1P21695 349 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 HOXD9P28356 352 aaPredicted RBP9.3□□□□□ -0.92
SPG11-207ENST00000558138 SLC6A4P31645 630 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 FLT3P36888 993 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 GGCXP38435 758 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 FNTBP49356 437 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 SGSHP51688 502 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 DGKEP52429 567 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 MS4A13Q5J8X5 152 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 BRMS1LQ5PSV4 323 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 EMC10Q5UCC4 262 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 PIK3R6Q5UE93 754 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 NADSYN1Q6IA69 706 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 SCYL2Q6P3W7 929 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 PKN3Q6P5Z2 889 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 LRRC31Q6UY01 552 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 PRR23BQ6ZRT6 265 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 CEP68Q76N32 757 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 CHST9Q7L1S5 443 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 ZNF571Q7Z3V5 609 aaPredicted RBP9.3□□□□□ -0.92
SPG11-207ENST00000558138 SFTPA1Q8IWL2 248 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 FAM217AQ8IXS0 508 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 CFAP52Q8N1V2 620 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 C3orf20Q8ND61 904 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 USP33Q8TEY7 942 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 AZIN2Q96A70 460 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 TRIM11Q96F44 468 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 SLC39A13Q96H72 371 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 NPY6RQ99463 290 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 SLC2A11Q9BYW1 496 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 TTYH3Q9C0H2 523 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 PRMT8Q9NR22 394 aaPredicted RBP9.3□□□□□ -0.92
SPG11-207ENST00000558138 PIGVQ9NUD9 493 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 ABCB8Q9NUT2 735 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 TMEM51Q9NW97 253 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 ZSCAN32Q9NX65 697 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 TAS2R14Q9NYV8 317 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 MYO1AQ9UBC5 1043 aa9.3□□□□□ -0.92
SPG11-207ENST00000558138 XPO7Q9UIA9 1087 aaKnown RBP9.3□□□□□ -0.92
SPG11-207ENST00000558138 KIAA1549LQ6ZVL6 1849 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 TCRBV21S2A2A0A5A6 115 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 ATMINO43313 823 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 SYNCRIPO60506 623 aaKnown RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 SRGAP2O75044 1071 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 PAGE1O75459 146 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 APBB3O95704 486 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 IGLV3-25P01717 112 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 FTLP02792 175 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 PABPC1P11940 636 aaKnown RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 POLR2EP19388 210 aaKnown RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 RRM1P23921 792 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 PSMA2P25787 234 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 PBX1P40424 430 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 PRKCIP41743 596 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 PXNP49023 591 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 ATXN1P54253 815 aaKnown RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 ST8SIA6P61647 398 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 RPS24P62847 133 aaKnown RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 MESP2Q0VG99 397 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 GAS6Q14393 721 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 STARD3Q14849 445 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 GEN1Q17RS7 908 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 C15orf59Q2T9L4 293 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 ZNF528Q3MIS6 628 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 HSF5Q4G112 596 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 FNDC3BQ53EP0 1204 aaKnown RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 FAM133BQ5BKY9 247 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms