RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 HECTD1Q9ULT8 2610 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 UMODL1Q5DID0 1318 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 COL4A4P53420 1690 aaPredicted RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 CNOT1A5YKK6 2376 aaKnown RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 A0A1W2PPL8 197 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 SLC15A5A6NIM6 579 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 E7ENX8 843 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 FAM227AF5H4B4 570 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 PEX1O43933 1283 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 UNC5CO95185 931 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 PGK1P00558 417 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 LMNAP02545 664 aaKnown RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 PCCAP05165 728 aaPredicted RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 BMP5P22003 454 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 CXCR5P32302 372 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 KCNJ4P48050 445 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 HMGCS2P54868 508 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 TAP2Q03519 686 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 FOXI1Q12951 378 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 PRAMEF19Q5SWL8 479 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 CHST15Q7LFX5 561 aaPredicted RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 ADGRG5Q8IZF4 528 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 PSD4Q8NDX1 1056 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 GPR150Q8NGU9 434 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 IL31RAQ8NI17 732 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 PABPC5Q96DU9 382 aaKnown RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 C22orf23Q9BZE7 217 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 PANK3Q9H999 370 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 STARD7Q9NQZ5 370 aa6.81□□□□□ -1.32
RTF1-204ENST00000558117 PIH1D1Q9NWS0 290 aaKnown RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.81□□□□□ -1.32
RTF1-204ENST00000558117 ITPR1Q14643 2758 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 CFAP69A5D8W1 941 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 PHGDHO43175 533 aaKnown RBP6.8□□□□□ -1.32
RTF1-204ENST00000558117 PPFIA2O75334 1257 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 PIM1P11309 404 aaPredicted RBP6.8□□□□□ -1.32
RTF1-204ENST00000558117 HOXA7P31268 230 aaPredicted RBP6.8□□□□□ -1.32
RTF1-204ENST00000558117 ACLYP53396 1101 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 MRPS35P82673 323 aaKnown RBP6.8□□□□□ -1.32
RTF1-204ENST00000558117 CHRNDQ07001 517 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 TCP10Q12799 353 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 SPP2Q13103 211 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 GRB14Q14449 540 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 FAM160B1Q5W0V3 765 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 CCAR1Q8IX12 1150 aaKnown RBP6.8□□□□□ -1.32
RTF1-204ENST00000558117 LNX2Q8N448 690 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 SLC30A5Q8TAD4 765 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 TEKT1Q969V4 418 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 RIPOR3Q96MK2 946 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 TRIM54Q9BYV2 358 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 FAM204AQ9H8W3 233 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 XPNPEP3Q9NQH7 507 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 MED16Q9Y2X0 877 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 PHIPQ8WWQ0 1821 aa6.8□□□□□ -1.32
RTF1-204ENST00000558117 MROH7Q68CQ1 1323 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 IGSF10Q6WRI0 2623 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 TAF4O00268 1085 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 TPP1O14773 563 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 MBTPS2O43462 519 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 ORC4O43929 436 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 NUDT3O95989 172 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 CD4P01730 458 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 PROS1P07225 676 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 MPLP40238 635 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 NPTX2P47972 431 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 ARFIP2P53365 341 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 IRX3P78415 501 aaPredicted RBP6.79□□□□□ -1.32
RTF1-204ENST00000558117 HLXQ14774 488 aaPredicted RBP6.79□□□□□ -1.32
RTF1-204ENST00000558117 APOA5Q6Q788 366 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 OLFML1Q6UWY5 402 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 TSHZ1Q6ZSZ6 1077 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 CCDC149Q6ZUS6 474 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 MICALCLQ6ZW33 695 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 HERC6Q8IVU3 1022 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 DCLK2Q8N568 766 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 B3GALNT2Q8NCR0 500 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 PHOSPHO2Q8TCD6 241 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 KCNG4Q8TDN1 519 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 ACTRT2Q8TDY3 377 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 HNRNPABQ99729 332 aaKnown RBP6.79□□□□□ -1.32
RTF1-204ENST00000558117 HEPHQ9BQS7 1158 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 BHMT2Q9H2M3 363 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 RIOX1Q9H6W3 641 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 LOC400499M0QZD8 3231 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 LOC285556D6RIA3 1793 aa6.79□□□□□ -1.32
RTF1-204ENST00000558117 SALL3Q9BXA9 1300 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 A0A1B0GUL7 405 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 LOC730098B7Z3J9 87 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 F5H697 171 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 DCLK1O15075 740 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 TPD52L2O43399 206 aaKnown RBP6.78□□□□□ -1.32
RTF1-204ENST00000558117 TAF5LO75529 589 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 CNMDO75829 334 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 SOAT2O75908 522 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 ZBED1O96006 694 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 GRPP07492 148 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
RTF1-204ENST00000558117 CCL23P55773 120 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 COL10A1Q03692 680 aa6.78□□□□□ -1.32
RTF1-204ENST00000558117 KIAA0753Q2KHM9 967 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms