RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 RASGEF1CQ8N431 466 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 CELF5Q8N6W0 485 aaKnown RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 MAFAQ8NHW3 353 aaPredicted RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 ITFG1Q8TB96 612 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 KRT35Q92764 455 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 RUNDC3BQ96NL0 473 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 FERMT1Q9BQL6 677 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 CALN1Q9BXU9 219 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 OSBPL8Q9BZF1 889 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 UBE2ZQ9H832 354 aaPredicted RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 OR12D3Q9UGF7 316 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 FEZ2Q9UHY8 353 aaPredicted RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 CD207Q9UJ71 328 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 PACSIN2Q9UNF0 486 aaPredicted RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 RAD54BQ9Y620 910 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 CPQQ9Y646 472 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 F5H5T6 163 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
TPM1-209ENST00000558072 ACSL4O60488 711 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 PAGE1O75459 146 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 STC2O76061 302 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 TFE3P19532 575 aaPredicted RBP12.83□□□□□ -0.36
TPM1-209ENST00000558072 IL1R2P27930 398 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 SERPINB6P35237 376 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 DNA2P51530 1060 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 TPI1P60174 286 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 AMPD2Q01433 879 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 SMTNL2Q2TAL5 461 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 PPP6R3Q5H9R7 873 aaPredicted RBP12.83□□□□□ -0.36
TPM1-209ENST00000558072 KCNT1Q5JUK3 1230 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 ADGRF1Q5T601 910 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 SPOCD1Q6ZMY3 1216 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 HTR3DQ70Z44 454 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 GET4Q7L5D6 327 aaPredicted RBP12.83□□□□□ -0.36
TPM1-209ENST00000558072 OTOP3Q7RTS5 596 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 CPNE8Q86YQ8 564 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 ALG3Q92685 438 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 ACSF2Q96CM8 615 aaPredicted RBP12.83□□□□□ -0.36
TPM1-209ENST00000558072 TBC1D31Q96DN5 1066 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 RNF38Q9H0F5 515 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 SMG9Q9H0W8 520 aaKnown RBP12.83□□□□□ -0.36
TPM1-209ENST00000558072 PCDH18Q9HCL0 1135 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 THG1LQ9NWX6 298 aaKnown RBP12.83□□□□□ -0.36
TPM1-209ENST00000558072 STOML2Q9UJZ1 356 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 CDH7Q9ULB5 785 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 DENND4CQ5VZ89 1909 aa12.83□□□□□ -0.36
TPM1-209ENST00000558072 CCDC188H7C350 402 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 SCAMP3O14828 347 aaKnown RBP12.82□□□□□ -0.36
TPM1-209ENST00000558072 NCAM2O15394 837 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 MSI1O43347 362 aaKnown RBP12.82□□□□□ -0.36
TPM1-209ENST00000558072 MOCS2O96007 188 aaPredicted RBP12.82□□□□□ -0.36
TPM1-209ENST00000558072 CYBBP04839 570 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 PYGMP11217 842 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 TGM2P21980 687 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 CORO1AP31146 461 aaKnown RBP12.82□□□□□ -0.36
TPM1-209ENST00000558072 CDKN2BP42772 138 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 NR2C2P49116 596 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 ARSEP51690 589 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 OXCT1P55809 520 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 LMNB2Q03252 620 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 TAZQ16635 292 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 SLC13A5Q86YT5 568 aaPredicted RBP12.82□□□□□ -0.36
TPM1-209ENST00000558072 LRRC49Q8IUZ0 686 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 CCDC185Q8N715 623 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 SMARCD2Q92925 531 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 RNF25Q96BH1 459 aaPredicted RBP12.82□□□□□ -0.36
TPM1-209ENST00000558072 HAUS1Q96CS2 278 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 FAF2Q96CS3 445 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 PEBP4Q96S96 227 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 TRPV4Q9HBA0 871 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 USP15Q9Y4E8 981 aaPredicted RBP12.82□□□□□ -0.36
TPM1-209ENST00000558072 MRFAP1Q9Y605 127 aa12.82□□□□□ -0.36
TPM1-209ENST00000558072 EYSQ5T1H1 3165 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 LEFTY2O00292 366 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 APOL1O14791 398 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CREB3O43889 395 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 FGGP02679 453 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 HMBSP08397 361 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 MX2P20592 715 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 EPHB2P29323 1055 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CXCR5P32302 372 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 ETFBP38117 255 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
TPM1-209ENST00000558072 DPYSL3Q14195 570 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CBX2Q14781 532 aaPredicted RBP12.81□□□□□ -0.36
TPM1-209ENST00000558072 ANKRD20A8PQ5CZ79 823 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 MPP7Q5T2T1 576 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms